RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 SGCEO43556 437 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 GLCEO94923 617 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 ZNF823P16415 610 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 STOMP27105 288 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 GSTT1P30711 240 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 HIST1H3AP68431 136 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 ADAM8P78325 824 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 SCRN3Q0VDG4 424 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 APOFQ13790 326 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 OGFRL1Q5TC84 451 aaPredicted RBP11.04□□□□□ -0.64
SS18-202ENST00000269138 HIST2H3PS2Q5TEC6 136 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 SLC18B1Q6NT16 456 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 TMEM154Q6P9G4 183 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 CFAP77Q6ZQR2 320 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 HIST2H3AQ71DI3 136 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 VASH1Q7L8A9 365 aaPredicted RBP11.04□□□□□ -0.64
SS18-202ENST00000269138 DEPDC4Q8N2C3 294 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 IL17RDQ8NFM7 739 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 SLC7A6Q92536 515 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 HRASLS5Q96KN8 279 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 POM121L2Q96KW2 1035 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 CDADC1Q9BWV3 514 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 RNPEPL1Q9HAU8 725 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 CYB5R1Q9UHQ9 305 aa11.04□□□□□ -0.64
SS18-202ENST00000269138 NOTCH2Q04721 2471 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 RTTNQ86VV8 2226 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 ZNF593O00488 134 aaPredicted RBP11.03□□□□□ -0.64
SS18-202ENST00000269138 DOK2O60496 412 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 CCNOP22674 350 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 APLNRP35414 380 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 ENTPD1P49961 510 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 RPS7P62081 194 aaKnown RBP11.03□□□□□ -0.64
SS18-202ENST00000269138 SLC34A1Q06495 639 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 AADACL4Q5VUY2 407 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 KRT80Q6KB66 452 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 VHLLQ6RSH7 139 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 FAM81AQ8TBF8 368 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 SMAP2Q8WU79 429 aaPredicted RBP11.03□□□□□ -0.64
SS18-202ENST00000269138 NRG4Q8WWG1 115 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 MAP6Q96JE9 813 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 WACQ9BTA9 647 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 PRRG3Q9BZD7 231 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 OR51B6Q9H340 312 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 MARCH7Q9H992 704 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 CDH20Q9HBT6 801 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 FAM118AQ9NWS6 357 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 PLEK2Q9NYT0 353 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 GDF2Q9UK05 429 aaPredicted RBP11.03□□□□□ -0.64
SS18-202ENST00000269138 NDRG4Q9ULP0 352 aaKnown RBP11.03□□□□□ -0.64
SS18-202ENST00000269138 PLEKHA6Q9Y2H5 1048 aa11.03□□□□□ -0.64
SS18-202ENST00000269138 LRBAP50851 2863 aa11.02□□□□□ -0.64
SS18-202ENST00000269138 HEATR1Q9H583 2144 aaKnown RBP11.02□□□□□ -0.65
SS18-202ENST00000269138 C5orf49A4QMS7 147 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 OR6C6A6NF89 314 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 PRODHO43272 600 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 SYNGR3O43761 229 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 SELENOFO60613 162 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 PTHP01270 115 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 SOD3P08294 240 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 DBHP09172 617 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 SPARCP09486 303 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 NR4A1P22736 598 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 THBS4P35443 961 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 HTR5AP47898 357 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 GDI2P50395 445 aaKnown RBP11.02□□□□□ -0.65
SS18-202ENST00000269138 BLVRAP53004 296 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 NKX6-1P78426 367 aaPredicted RBP11.02□□□□□ -0.65
SS18-202ENST00000269138 PCK2Q16822 640 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 TBC1D28Q2M2D7 210 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 ERI1Q8IV48 349 aaKnown RBP11.02□□□□□ -0.65
SS18-202ENST00000269138 TIGD4Q8IY51 512 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 ALDH16A1Q8IZ83 802 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 ZNF611Q8N823 705 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 GJC3Q8NFK1 279 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 OR4F15Q8NGB8 312 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 OR10S1Q8NGN2 331 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 OR2AJ1Q8NGZ0 328 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 OR1F12Q8NHA8 337 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 FBXW5Q969U6 566 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 INTS14Q96SY0 518 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 TEAD3Q99594 435 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 PITX2Q99697 317 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 DHRS9Q9BPW9 319 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 C1orf198Q9H425 327 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 PNRC2Q9NPJ4 139 aaKnown RBP11.02□□□□□ -0.65
SS18-202ENST00000269138 SMPD3Q9NY59 655 aaPredicted RBP11.02□□□□□ -0.65
SS18-202ENST00000269138 AASSQ9UDR5 926 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 ST6GALNAC2Q9UJ37 374 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 KCNG2Q9UJ96 466 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 GMPPBQ9Y5P6 360 aa11.02□□□□□ -0.65
SS18-202ENST00000269138 LOC100130705A0A1B0GUX0 176 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 GPRIN2O60269 458 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 DANCRP0C864 163 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 FAM157BP0CG42 384 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 CD53P19397 219 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 WNT5AP41221 380 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 NAA10P41227 235 aaPredicted RBP11.01□□□□□ -0.65
SS18-202ENST00000269138 FABP6P51161 128 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 HCCSP53701 268 aa11.01□□□□□ -0.65
SS18-202ENST00000269138 CDC42P60953 191 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms