RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 LTBQ06643 244 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PLEKHN1Q494U1 663 aaPredicted RBP14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 C10orf91Q5T1B1 145 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TMPRSS12Q86WS5 348 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 GKN2Q86XP6 184 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 SLC35F3Q8IY50 421 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TREM1Q9NP99 234 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 DUSP22Q9NRW4 184 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 C1orf196B1AJZ1 125 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 RPP14O95059 124 aaKnown RBP14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 IFNGP01579 166 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CD3DP04234 171 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 DBIP07108 87 aaKnown RBP14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ABCD3P28288 659 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PGDP52209 483 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 SHBQ15464 509 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 C3orf33Q6P1S2 294 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 DNM1P46Q6ZS02 220 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TMED4Q7Z7H5 227 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 KCNRGQ8N5I3 272 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PHYHIPQ92561 330 aa14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CPNE2Q96FN4 548 aaPredicted RBP14.39□□□□□ -0.11
MAP1LC3B-201ENST00000268607 OR5H14A6NHG9 310 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ZNF705EA8MWA4 302 aaPredicted RBP14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 M0R296 226 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 GPRIN2O60269 458 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 FADS1O60427 444 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 IGKV1D-16P01601 117 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 MAS1P04201 325 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ABOP16442 354 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 MAOAP21397 527 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 AGTR1P30556 359 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 EMDP50402 254 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 RAB38P57729 211 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PSG6Q00889 435 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TAF13Q15543 124 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 RNF212Q495C1 297 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 EIPR1Q53HC9 387 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 WDSUB1Q8N9V3 476 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 RBM18Q96H35 190 aaKnown RBP14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ICAM5Q9UMF0 924 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 LOC400499M0QZD8 3231 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 A0A087WV62 115 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 IGHV5-51A0A0C4DH38 117 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 A0A1B0GV90 55 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PRR32B1ATL7 298 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 LMO7DNF2Z398 122 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 BCL2L11O43521 198 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CLN5O75503 358 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 FARS2O95363 451 aaKnown RBP14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CSF1P09603 554 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 GIMD1P0DJR0 217 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 HYAL4Q2M3T9 481 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 AKIRIN2Q53H80 203 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 STEAP2Q8NFT2 490 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 OR6K6Q8NGW6 343 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PAQR8Q8TEZ7 354 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CTHRC1Q96CG8 243 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 A0A1B0GTQ1 180 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CPED1A4D0V7 1026 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 FAM221BA6H8Z2 402 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 GPR37O15354 613 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 XRCC3O43542 346 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 FOXS1O43638 330 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 BRINP1O60477 761 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CD1AP06126 327 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 THBS1P07996 1170 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 MNDAP41218 407 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 EFNB2P52799 333 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PMS2CLQ68D20 193 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ARHGAP11AQ6P4F7 1023 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 LRRTM1Q86UE6 522 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 POMGNT2Q8NAT1 580 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 C15orf40Q8WUR7 153 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 SEC22AQ96IW7 307 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TCEAL7Q9BRU2 100 aa14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ATXN7L1Q9ULK2 861 aaPredicted RBP14.38□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ALPK2Q86TB3 2170 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 RHPN2P1A8MT19 583 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 FAM171A2A8MVW0 826 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 OR4E1P0C645 316 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 SLC35E2P0CK97 266 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 AKAIN1P0CW23 69 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TDGF1P13385 188 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 MUC1P15941 1255 aaPredicted RBP14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 S1PR1P21453 382 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 SLC6A6P31641 620 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 P2RY4P51582 365 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 FAM53BQ14153 422 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 PON3Q15166 354 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 GLT8D1Q68CQ7 371 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 UNQ6126/PRO20091Q6UXV3 157 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 DMRTC2Q8IXT2 367 aaPredicted RBP14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 CNTNAP3BQ96NU0 1288 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ELF4Q99607 663 aaPredicted RBP14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 FBXO4Q9UKT5 387 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TNFSF18Q9UNG2 199 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 ADAM18Q9Y3Q7 739 aa14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 TMEM184BQ9Y519 407 aaPredicted RBP14.37□□□□□ -0.11
MAP1LC3B-201ENST00000268607 IER3IP1Q9Y5U9 82 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms