RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CCDC71LQ8N9Z2 235 aa10.52□□□□□ -0.72
VPS33A-201ENST00000267199 PELI1Q96FA3 418 aa10.52□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF578Q96N58 590 aaPredicted RBP10.52□□□□□ -0.72
VPS33A-201ENST00000267199 OR11A1Q9GZK7 315 aa10.52□□□□□ -0.72
VPS33A-201ENST00000267199 SLCO5A1Q9H2Y9 848 aa10.52□□□□□ -0.72
VPS33A-201ENST00000267199 NELFAQ9H3P2 528 aa10.52□□□□□ -0.72
VPS33A-201ENST00000267199 PCYT1BQ9Y5K3 369 aaPredicted RBP10.52□□□□□ -0.72
VPS33A-201ENST00000267199 GALR3O60755 368 aaPredicted RBP10.52□□□□□ -0.73
VPS33A-201ENST00000267199 TBX19O60806 448 aa10.52□□□□□ -0.73
VPS33A-201ENST00000267199 CISD3P0C7P0 127 aa10.52□□□□□ -0.73
VPS33A-201ENST00000267199 NQO2P16083 231 aa10.52□□□□□ -0.73
VPS33A-201ENST00000267199 ALOX5APP20292 161 aa10.52□□□□□ -0.73
VPS33A-201ENST00000267199 TAGLN2P37802 199 aaKnown RBP10.52□□□□□ -0.73
VPS33A-201ENST00000267199 GPR85P60893 370 aa10.52□□□□□ -0.73
VPS33A-201ENST00000267199 RPS18P62269 152 aaKnown RBP10.52□□□□□ -0.73
VPS33A-201ENST00000267199 MRPS34P82930 218 aaKnown RBP10.52□□□□□ -0.73
VPS33A-201ENST00000267199 NTMQ9P121 344 aa10.52□□□□□ -0.73
VPS33A-201ENST00000267199 TMEM200CA6NKL6 621 aa10.52□□□□□ -0.73
VPS33A-201ENST00000267199 MLC1Q15049 377 aa10.52□□□□□ -0.73
VPS33A-201ENST00000267199 MPEG1Q2M385 716 aa10.52□□□□□ -0.73
VPS33A-201ENST00000267199 TET1Q8NFU7 2136 aa10.52□□□□□ -0.73
VPS33A-201ENST00000267199 LCORQ96JN0 433 aaPredicted RBP10.52□□□□□ -0.73
VPS33A-201ENST00000267199 NXF2Q9GZY0 626 aaKnown RBP10.52□□□□□ -0.73
VPS33A-201ENST00000267199 PTPRZ1P23471 2315 aaPredicted RBP10.52□□□□□ -0.73
VPS33A-201ENST00000267199 ZNF638Q14966 1978 aaKnown RBP10.52□□□□□ -0.73
VPS33A-201ENST00000267199 OR5K3A6NET4 321 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 CDC42EP2O14613 210 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 TNFRSF10CO14798 259 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 NDUFB6O95139 128 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 OR2W3Q7Z3T1 314 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 LHFPL5Q8TAF8 219 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 SPIN2AQ99865 258 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 SPIN2BQ9BPZ2 258 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 NMNAT2Q9BZQ4 307 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 FAM96BQ9Y3D0 163 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 LINC00862A6NCI5 91 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 SUSD5O60279 629 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 NXPH3O95157 252 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 BPNT1O95861 308 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 DBHP09172 617 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 NAGAP17050 411 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 KIAA0895LQ68EN5 471 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 HIST2H3AQ71DI3 136 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 TRILQ7L0X0 811 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 MARCH1Q8TCQ1 289 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 HSD17B8Q92506 261 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 ZNF775Q96BV0 537 aaPredicted RBP10.51□□□□□ -0.73
VPS33A-201ENST00000267199 ARHGDIGQ99819 225 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 A0A1B0GTH9 108 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 OR2W5A6NFC9 320 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 SERPINE2P07093 398 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 SLC35D3Q5M8T2 416 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 THSD4Q6ZMP0 1018 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 DCXRQ7Z4W1 244 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 CBLN2Q8IUK8 224 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 RCBTB1Q8NDN9 531 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 ZNF75AQ96N20 296 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 CMSS1Q9BQ75 279 aaKnown RBP10.51□□□□□ -0.73
VPS33A-201ENST00000267199 C6orf106Q9H6K1 298 aaPredicted RBP10.51□□□□□ -0.73
VPS33A-201ENST00000267199 SCPEP1Q9HB40 452 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 C1orf123Q9NWV4 160 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 PCDHGA1Q9Y5H4 931 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 TRAV1-2A0A0B4J238 106 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 OR6C76A6NM76 312 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 EN2P19622 333 aaPredicted RBP10.51□□□□□ -0.73
VPS33A-201ENST00000267199 BTG2P78543 158 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 CAMK2DQ13557 499 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 PHLDA2Q53GA4 152 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 MANEAQ5SRI9 462 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 CORO6Q6QEF8 472 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 GLIPR1L1Q6UWM5 242 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 SEZ6L2Q6UXD5 910 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 FAM160A2Q8N612 972 aaPredicted RBP10.51□□□□□ -0.73
VPS33A-201ENST00000267199 PLPP5Q8NEB5 264 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 C12orf10Q9HB07 376 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 OR52A1Q9UKL2 312 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 KPTNQ9Y664 436 aa10.51□□□□□ -0.73
VPS33A-201ENST00000267199 UMAD1C9J7I0 102 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 STMND1H3BQB6 276 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 CDK2AP1O14519 115 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 ZFPL1O95159 310 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 DCAF7P61962 342 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 TMEM196Q5HYL7 178 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 SLC22A24Q8N4F4 322 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 FAM71CQ8NEG0 241 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 OR56B1Q8NGI3 324 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 OR1S2Q8NGQ3 325 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 BAHD1Q8TBE0 780 aaPredicted RBP10.5□□□□□ -0.73
VPS33A-201ENST00000267199 DCBLD2Q96PD2 775 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 PPP1R3EQ9H7J1 279 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 EXOSC3Q9NQT5 275 aaKnown RBP10.5□□□□□ -0.73
VPS33A-201ENST00000267199 ABI3Q9P2A4 366 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 KCNG2Q9UJ96 466 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 COA3Q9Y2R0 106 aaPredicted RBP10.5□□□□□ -0.73
VPS33A-201ENST00000267199 PRAMEF27A3QJZ7 478 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 BLACEA4D250 179 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 OGFOD3Q6PK18 319 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 KIRREL2Q6UWL6 708 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 SFTPA1Q8IWL2 248 aa10.5□□□□□ -0.73
VPS33A-201ENST00000267199 SLC43A2Q8N370 569 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms