RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 HTR2CP28335 458 aa12.97□□□□□ -0.33
PDLIM2-201ENST00000265810 ATP1B3P54709 279 aa12.97□□□□□ -0.33
PDLIM2-201ENST00000265810 BDH1Q02338 343 aa12.97□□□□□ -0.33
PDLIM2-201ENST00000265810 CLN3Q13286 438 aa12.97□□□□□ -0.33
PDLIM2-201ENST00000265810 SPIN3Q5JUX0 258 aa12.97□□□□□ -0.33
PDLIM2-201ENST00000265810 PPP1R32Q7Z5V6 425 aa12.97□□□□□ -0.33
PDLIM2-201ENST00000265810 IL17RDQ8NFM7 739 aa12.97□□□□□ -0.33
PDLIM2-201ENST00000265810 OBP2BQ9NPH6 170 aa12.97□□□□□ -0.33
PDLIM2-201ENST00000265810 ZNF69Q9UC07 566 aa12.97□□□□□ -0.33
PDLIM2-201ENST00000265810 AQP6Q13520 282 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 GLYATL3Q5SZD4 288 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 FAM27D1Q5T7N8 215 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 OR2M7Q8NG81 312 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 OR9K2Q8NGE7 335 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 OR51D1Q8NGF3 324 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 THAP7Q9BT49 309 aaPredicted RBP12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 A0A1B0GW55 424 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 NTN3O00634 580 aaPredicted RBP12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 CRYABP02511 175 aaKnown RBP12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 GUSBP08236 651 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 DUX4L2P0CJ85 424 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 DUX4L3P0CJ86 424 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 DUX4L4P0CJ87 422 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 DUX4L5P0CJ88 424 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 DUX4L6P0CJ89 424 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 DUX4L7P0CJ90 424 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 ECH1Q13011 328 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 MESTQ5EB52 335 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 MESP1Q9BRJ9 268 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 DUX4Q9UBX2 424 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 MPZL1O95297 269 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 BGLAPP02818 100 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 PLPPR5Q32ZL2 321 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 RNASE10Q5GAN6 216 aaKnown RBP12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 ACBD4Q8NC06 268 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 NPEPL1Q8NDH3 523 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 BHLHE23Q8NDY6 225 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 DNAAF1Q8NEP3 725 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 MCHR2Q969V1 340 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 FOXB1Q99853 325 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 SLC26A1Q9H2B4 701 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 TRAPPC4Q9Y296 219 aa12.96□□□□□ -0.33
PDLIM2-201ENST00000265810 GABRR1P24046 479 aa12.96□□□□□ -0.34
PDLIM2-201ENST00000265810 LIMS1P48059 325 aa12.96□□□□□ -0.34
PDLIM2-201ENST00000265810 IDH3GP51553 393 aaPredicted RBP12.96□□□□□ -0.34
PDLIM2-201ENST00000265810 CD83Q01151 205 aa12.96□□□□□ -0.34
PDLIM2-201ENST00000265810 C3AR1Q16581 482 aa12.96□□□□□ -0.34
PDLIM2-201ENST00000265810 SCGB3A2Q96PL1 93 aa12.96□□□□□ -0.34
PDLIM2-201ENST00000265810 PLEKHJ1Q9NW61 149 aa12.96□□□□□ -0.34
PDLIM2-201ENST00000265810 CGGBP1Q9UFW8 167 aaPredicted RBP12.96□□□□□ -0.34
PDLIM2-201ENST00000265810 PLSCR5A0PG75 271 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 SERPINA5P05154 406 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 ACHEP22303 614 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 PCGF3Q3KNV8 242 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 MRPL14Q6P1L8 145 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 TSEN54Q7Z6J9 526 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 PIGTQ969N2 578 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 OR8B4Q96RC9 309 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 DCLRE1CQ96SD1 692 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 PTP4A3O75365 173 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 SP1P08047 785 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 HLA-DOBP13765 273 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 ACTBP60709 375 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 ACTG1P63261 375 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 PGAP1Q75T13 922 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 AKR7LQ8NHP1 331 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 SLC25A46Q96AG3 418 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 PELI1Q96FA3 418 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 UCN2Q96RP3 112 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 SLC6A7Q99884 636 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 GLS2Q9UI32 602 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 PIGLQ9Y2B2 252 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 LYRM1O43325 122 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 APEX1P27695 318 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 ZNF93P35789 620 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 FXYD6P3P58550 94 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 CCDC92Q53HC0 331 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 ZNF684Q5T5D7 378 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 SULF2Q8IWU5 870 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 ZNF611Q8N823 705 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 OR1J2Q8NGS2 313 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 FNDC9Q8TBE3 224 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 CASTOR1Q8WTX7 329 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 AKAP1Q92667 903 aaKnown RBP eCLIP12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 LIN7BQ9HAP6 207 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 GPR84Q9NQS5 396 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 PROCRQ9UNN8 238 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 RHBDD3Q9Y3P4 386 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 TEX13DA0A0J9YY54 714 aaPredicted RBP12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 A0A1W2PQ09 198 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 ZNF850A8MQ14 1090 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 RIPPLY1Q0D2K3 151 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 SLCO5A1Q9H2Y9 848 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 CCDC86Q9H6F5 360 aaKnown RBP12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 DUSP13Q9UII6 198 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 R4GMQ9 66 aa12.95□□□□□ -0.34
PDLIM2-201ENST00000265810 HELZP42694 1942 aaKnown RBP12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 C5orf51A6NDU8 294 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 HERV-K104P61576 105 aa12.94□□□□□ -0.34
PDLIM2-201ENST00000265810 SLC25A24Q6NUK1 477 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms