RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 ZNF81P51508 661 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 TEKQ02763 1124 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 GLO1Q04760 184 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 DGCR6Q14129 220 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 TSTQ16762 297 aaKnown RBP8.27□□□□□ -1.09
VPS41-201ENST00000265745 ZBED5Q49AG3 693 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 HSP90B2PQ58FF3 399 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 FAM209AQ5JX71 171 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 SPATA46Q5T0L3 261 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 ZNF774Q6NX45 483 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 RINLQ6ZS11 566 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 USP51Q70EK9 711 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 SLC25A40Q8TBP6 338 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 SLC7A13Q8TCU3 470 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 KLF14Q8TD94 323 aaPredicted RBP8.27□□□□□ -1.09
VPS41-201ENST00000265745 OR2J1Q9GZK6 312 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 ANKRD19PQ9H560 264 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 LPAR2Q9HBW0 351 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 MED4Q9NPJ6 270 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 POLE4Q9NR33 117 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 DECR2Q9NUI1 292 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 NDUFAF4Q9P032 175 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 GRHPRQ9UBQ7 328 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 KLHL21Q9UJP4 597 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 ADAM18Q9Y3Q7 739 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 CACNG2Q9Y698 323 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 ENPP4Q9Y6X5 453 aa8.27□□□□□ -1.09
VPS41-201ENST00000265745 YLPM1P49750 1951 aaKnown RBP8.26□□□□□ -1.09
VPS41-201ENST00000265745 A0A1W2PPL8 197 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 PRSS37A4D1T9 235 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 H7C1C5 153 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 SPRY3O43610 288 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 ADH4P08319 380 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 COX5BP10606 129 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 ANPEPP15144 967 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 NCK1P16333 377 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 RPL4P36578 427 aaKnown RBP8.26□□□□□ -1.09
VPS41-201ENST00000265745 LIPAP38571 399 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 NUDT2P50583 147 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 PSME3P61289 254 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 PPP1CBP62140 327 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 LCN6P62502 163 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 MVKQ03426 396 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 HFEQ30201 348 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 AVPI1Q5T686 147 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 ACSM5Q6NUN0 579 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 RFPL4BQ6ZWI9 263 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 RRM2BQ7LG56 351 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 FAM122BQ7Z309 247 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 CYP4Z1Q86W10 505 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 OR51F2Q8NH61 342 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 ABHD4Q8TB40 342 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 IPCEF1Q8WWN9 437 aaPredicted RBP8.26□□□□□ -1.09
VPS41-201ENST00000265745 CCL17Q92583 94 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 C7orf34Q96L11 122 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 C4orf45Q96LM5 186 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 Q96M85 177 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 LRRC37BQ96QE4 947 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 KCTD14Q9BQ13 255 aaPredicted RBP8.26□□□□□ -1.09
VPS41-201ENST00000265745 WACQ9BTA9 647 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 MYLK2Q9H1R3 596 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 SAP30LQ9HAJ7 183 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 ELOVL3Q9HB03 270 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 EMC7Q9NPA0 242 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 NRIP3Q9NQ35 241 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 CYSLTR2Q9NS75 346 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 ABCD2Q9UBJ2 740 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 RPS6KA6Q9UK32 745 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 SIGLEC7Q9Y286 467 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 GRIP1Q9Y3R0 1128 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 WIPI2Q9Y4P8 454 aa8.26□□□□□ -1.09
VPS41-201ENST00000265745 TRAV20A0A0B4J274 112 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 PLSCR5A0PG75 271 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 ZSCAN5BA6NJL1 495 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 CLDN25C9JDP6 229 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 H3BSA7 217 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 XKRYO14609 159 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 TPD52L2O43399 206 aaKnown RBP8.25□□□□□ -1.09
VPS41-201ENST00000265745 TCF21O43680 179 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 DEAF1O75398 565 aaPredicted RBP8.25□□□□□ -1.09
VPS41-201ENST00000265745 UBOX5O94941 541 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 H1F0P07305 194 aaKnown RBP8.25□□□□□ -1.09
VPS41-201ENST00000265745 CTLA4P16410 223 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 RHCEP18577 417 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 OMPP47874 163 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 LIMS1P48059 325 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 ARHGDIAP52565 204 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 PSG7Q13046 419 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 MESTQ5EB52 335 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 FAHD2BQ6P2I3 314 aaPredicted RBP8.25□□□□□ -1.09
VPS41-201ENST00000265745 ARL9Q6T311 187 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 C1orf229Q6ZS94 237 aaPredicted RBP8.25□□□□□ -1.09
VPS41-201ENST00000265745 FAM162AQ96A26 154 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 CMTM5Q96DZ9 223 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 ELMOD3Q96FG2 381 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 FAHD2AQ96GK7 314 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 TIMD4Q96H15 378 aa8.25□□□□□ -1.09
VPS41-201ENST00000265745 FAM46AQ96IP4 442 aaKnown RBP8.25□□□□□ -1.09
VPS41-201ENST00000265745 ELAC2Q9BQ52 826 aaKnown RBP8.25□□□□□ -1.09
VPS41-201ENST00000265745 METTL17Q9H7H0 456 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms