RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 MEP1BQ16820 701 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 NCMAPQ5T1S8 102 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 C6orf52Q5T4I8 152 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 LYPD4Q6UWN0 246 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 MEX3BQ6ZN04 569 aaKnown RBP12.41□□□□□ -0.42
SSBP1-201ENST00000265304 SHFQ7M4L6 423 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 SLC16A9Q7RTY1 509 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 MDP1Q86V88 176 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 C8orf59Q8N0T1 100 aaPredicted RBP12.41□□□□□ -0.42
SSBP1-201ENST00000265304 GJC3Q8NFK1 279 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 OR52N5Q8NH56 324 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 OTOSQ8NHW6 89 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 ST7LQ8TDW4 575 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 HTRA1Q92743 480 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 INTS14Q96SY0 518 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 OR2H1Q9GZK4 316 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 WNT5BQ9H1J7 359 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 KCNN2Q9H2S1 579 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 C1orf198Q9H425 327 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 RERGLQ9H628 205 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 ADGRL4Q9HBW9 690 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 PNRC2Q9NPJ4 139 aaKnown RBP12.41□□□□□ -0.42
SSBP1-201ENST00000265304 DDX28Q9NUL7 540 aaKnown RBP12.41□□□□□ -0.42
SSBP1-201ENST00000265304 CLN6Q9NWW5 311 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 ASH2LQ9UBL3 628 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 PLEKHB1Q9UF11 243 aaPredicted RBP12.41□□□□□ -0.42
SSBP1-201ENST00000265304 EXOGQ9Y2C4 368 aaKnown RBP12.41□□□□□ -0.42
SSBP1-201ENST00000265304 LRRC42Q9Y546 428 aa12.41□□□□□ -0.42
SSBP1-201ENST00000265304 ZNF593O00488 134 aaPredicted RBP12.4□□□□□ -0.42
SSBP1-201ENST00000265304 SYNGR3O43761 229 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 TMCC2O75069 709 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 PTHP01270 115 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 PSKH1P11801 424 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 ZNF823P16415 610 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 OTX1P32242 354 aaPredicted RBP12.4□□□□□ -0.42
SSBP1-201ENST00000265304 MTNR1AP48039 350 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 CSNK2BP67870 215 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 RSPO1Q2MKA7 263 aaPredicted RBP12.4□□□□□ -0.42
SSBP1-201ENST00000265304 KLHL12Q53G59 568 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 CCDC92Q53HC0 331 aaPredicted RBP12.4□□□□□ -0.42
SSBP1-201ENST00000265304 BEX5Q5H9J7 111 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 TMEM53Q6P2H8 277 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 CDC20BQ86Y33 519 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 LRRC18Q8N456 261 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 CPEB3Q8NE35 698 aaKnown RBP12.4□□□□□ -0.42
SSBP1-201ENST00000265304 OR6K6Q8NGW6 343 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 IPCEF1Q8WWN9 437 aaPredicted RBP12.4□□□□□ -0.42
SSBP1-201ENST00000265304 ZMYND19Q96E35 227 aaPredicted RBP12.4□□□□□ -0.42
SSBP1-201ENST00000265304 MAP6Q96JE9 813 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 FOXN4Q96NZ1 517 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 JAM3Q9BX67 310 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 RASSF1Q9NS23 344 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 DNAJC27Q9NZQ0 273 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 ARFGEF3Q5TH69 2177 aa12.4□□□□□ -0.42
SSBP1-201ENST00000265304 IGHV1-18A0A0C4DH31 117 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 DPRXA6NFQ7 191 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 TVP23AA6NH52 213 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 PATE4P0C8F1 98 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 ZNF35P13682 527 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 CD40P25942 277 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 NR1H2P55055 460 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 ADAM8P78325 824 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 ROM1Q03395 351 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 ECH1Q13011 328 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 PABPC1L2AQ5JQF8 200 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 DEGS2Q6QHC5 323 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 B3GLCTQ6Y288 498 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 VASH1Q7L8A9 365 aaPredicted RBP12.39□□□□□ -0.43
SSBP1-201ENST00000265304 DPY19L4Q7Z388 723 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 ALDH16A1Q8IZ83 802 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 OR10H5Q8NGA6 315 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 OR10S1Q8NGN2 331 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 RNF133Q8WVZ7 376 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 OTULINQ96BN8 352 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 C14orf79Q96F83 325 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 RADILQ96JH8 1075 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 POM121L2Q96KW2 1035 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 COQ7Q99807 217 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 HDHD2Q9H0R4 259 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 AASSQ9UDR5 926 aa12.39□□□□□ -0.43
SSBP1-201ENST00000265304 GDF2Q9UK05 429 aaPredicted RBP12.39□□□□□ -0.43
SSBP1-201ENST00000265304 DSCAMO60469 2012 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 A0A1W2PR80 420 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 CASKO14936 926 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 RER1O15258 196 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 SGCEO43556 437 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 HLA-DQA2P01906 255 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 OR2T7P0C7T2 308 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 CECR9P0C854 216 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 DBTP11182 482 aaKnown RBP12.38□□□□□ -0.43
SSBP1-201ENST00000265304 CD79AP11912 226 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 PCSK6P29122 969 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 NUDT6P53370 316 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 TUBA1BP68363 451 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 TUBA4AP68366 448 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 IL5RAQ01344 420 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 ZNF91Q05481 1191 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 PIGFQ07326 219 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 RAB40BQ12829 278 aa12.38□□□□□ -0.43
SSBP1-201ENST00000265304 SNTB1Q13884 538 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms