RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TRIP12Q14669 1992 aaPredicted RBP12.7□□□□□ -0.38
CDH3-201ENST00000264012 CABIN1Q9Y6J0 2220 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 IGHV1OR21-1A0A087WYE8 117 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 ANKRD34BA5PLL1 514 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 K7EPK0 472 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 AIPO00170 330 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 STK17BO94768 372 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 ALX3O95076 343 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 CELA2BP08218 269 aaPredicted RBP12.7□□□□□ -0.38
CDH3-201ENST00000264012 ZNF133P52736 654 aaPredicted RBP12.7□□□□□ -0.38
CDH3-201ENST00000264012 SUMO3P55854 103 aaPredicted RBP12.7□□□□□ -0.38
CDH3-201ENST00000264012 CATR1Q13166 79 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 ASAH1Q13510 395 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 DOC2BQ14184 412 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 TBC1D28Q2M2D7 210 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 ZNF628Q5EBL2 1059 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 GUSBP11Q6P575 273 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 WDR5BQ86VZ2 330 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 FAM71E2Q8N5Q1 922 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 OR51S1Q8NGJ8 323 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 SAV1Q9H4B6 383 aaPredicted RBP12.7□□□□□ -0.38
CDH3-201ENST00000264012 SLC22A13Q9Y226 551 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 TIMM10BQ9Y5J6 103 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 A0A0B4J2E0 115 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 A0A1B0GX12 115 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 M0R135 149 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 TBXA2RP21731 343 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 RPS27AP62979 156 aaKnown RBP12.7□□□□□ -0.38
CDH3-201ENST00000264012 UBA52P62987 128 aaKnown RBP12.7□□□□□ -0.38
CDH3-201ENST00000264012 RPP30P78346 268 aaKnown RBP12.7□□□□□ -0.38
CDH3-201ENST00000264012 OPCMLQ14982 345 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 KRBOX4Q5JUW0 171 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 OR56B2PQ8NGI1 322 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 UCN3Q969E3 161 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 ZNF799Q96GE5 643 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 ABHD6Q9BV23 337 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 GPR173Q9NS66 373 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 MOSPD3O75425 235 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 FBXO24O75426 580 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 TNFSF15O95150 251 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 MT-CO2P00403 227 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 LPLP06858 475 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 OR10A3P58181 314 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 DGCR2P98153 550 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 CAMK2BQ13554 666 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 SLC17A1Q14916 467 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 OR1L3Q8NH93 324 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 VN1R1Q9GZP7 353 aa12.7□□□□□ -0.38
CDH3-201ENST00000264012 ARPC4-TTLL3A0A0A6YYG9 625 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 RNF212BA8MTL3 300 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 RRP8O43159 456 aaKnown RBP12.69□□□□□ -0.38
CDH3-201ENST00000264012 SLC10A1Q14973 349 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 LPCAT3Q6P1A2 487 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 ALKAL2Q6UX46 152 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 MRPL41Q8IXM3 137 aaKnown RBP12.69□□□□□ -0.38
CDH3-201ENST00000264012 OR52N5Q8NH56 324 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 GPR119Q8TDV5 335 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 NRTNQ99748 197 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 KCNJ16Q9NPI9 418 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 TMEM9BQ9NQ34 198 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 COPS3Q9UNS2 423 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 ATG2BQ96BY7 2078 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 IFITM5A6NNB3 132 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 POM121CA8CG34 1229 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 TGM6O95932 706 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 FOLR1P15328 257 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 PRKACAP17612 351 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 NPY4RP50391 375 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 OR4Q3Q8NH05 313 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 GPR84Q9NQS5 396 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 FBXO7Q9Y3I1 522 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 TRPM6Q9BX84 2022 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 PMS2P2O95744 297 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 IFNA17P01571 189 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 ABCD3P28288 659 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 ZNF425Q6IV72 752 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 TMPRSS11FQ6ZWK6 438 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 KTI12Q96EK9 354 aaPredicted RBP12.69□□□□□ -0.38
CDH3-201ENST00000264012 RNF170Q96K19 258 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 NKX3-1Q99801 234 aaPredicted RBP12.69□□□□□ -0.38
CDH3-201ENST00000264012 TMEM43Q9BTV4 400 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 EDEM2Q9BV94 578 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 NMNAT2Q9BZQ4 307 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 LANCL2Q9NS86 450 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 COQ3Q9NZJ6 369 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 B9D1Q9UPM9 204 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 SIGLEC7Q9Y286 467 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 HDGFL3Q9Y3E1 203 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 TAF1LQ8IZX4 1826 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 HSPB2A8KAH6 182 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 PPP3CBP16298 524 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 TGM4P49221 684 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 RBP2P50120 134 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 PPP1CAP62136 330 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 BTG1P62324 171 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 HSPB2Q16082 182 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 ZNF74Q16587 644 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 HEPHL1Q6MZM0 1159 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 BCO1Q9HAY6 547 aa12.69□□□□□ -0.38
CDH3-201ENST00000264012 AKIP1Q9NQ31 210 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms