RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PTDSS2Q9BVG9 487 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 IKZF2Q9UKS7 526 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 TRAV36DV7A0A075B6V5 113 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 A0A0D9SG52 128 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 ZNF546Q86UE3 836 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 TDHQ8IZJ6 230 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 D2HGDHQ8N465 521 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 HAVCR1Q96D42 359 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 AMELYQ99218 206 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 SDK1Q7Z5N4 2213 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 IFNA4P05014 189 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 TAS2R20P59543 309 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 RPS15P62841 145 aaKnown RBP20.31■□□□□ 0.84
MCF2L-201ENST00000261963 SMAD4Q13485 552 aaKnown RBP20.31■□□□□ 0.84
MCF2L-201ENST00000261963 C1orf189Q5VU69 101 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 HLA-DQA1Q5Y7H0 255 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 CHRDL2Q6WN34 429 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 LRRTM1Q86UE6 522 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 OR2G2Q8NGZ5 317 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 OR10AC1Q8NH08 325 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 DAZLQ92904 295 aaKnown RBP20.31■□□□□ 0.84
MCF2L-201ENST00000261963 CCDC74AQ96AQ1 378 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 VN1R1Q9GZP7 353 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 GAREM1Q9H706 876 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 H0YC42 278 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 CDC40O60508 579 aaKnown RBP eCLIP20.31■□□□□ 0.84
MCF2L-201ENST00000261963 TMEM127O75204 238 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 ABCD3P28288 659 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 AGTR1P30556 359 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 SWI5Q1ZZU3 235 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 FAM209BQ5JX69 171 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 C12orf45Q8N5I9 185 aaPredicted RBP20.31■□□□□ 0.84
MCF2L-201ENST00000261963 ZNF441Q8N8Z8 693 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 INTS14Q96SY0 518 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 PCED1AQ9H1Q7 454 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 TCF7L1Q9HCS4 588 aa20.31■□□□□ 0.84
MCF2L-201ENST00000261963 UNC13CQ8NB66 2214 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 NUP210LQ5VU65 1888 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 TMEM218A2RU14 115 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 C11orf98E9PRG8 122 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 NUDT14O95848 222 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 MYF5P13349 255 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 OTPQ5XKR4 325 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 CBLN2Q8IUK8 224 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 OR1N1Q8NGS0 311 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 SLC25A28Q96A46 364 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 MRI1Q9BV20 369 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 TBL1XR1Q9BZK7 514 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 FOXQ1Q9C009 403 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 EDARQ9UNE0 448 aa20.3■□□□□ 0.84
MCF2L-201ENST00000261963 TMEM272A0A1B0GTI8 110 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 GLAP06280 429 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 MNDAP41218 407 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 EGR3Q06889 387 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 TSC22D1Q15714 1073 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 PCGF3Q3KNV8 242 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 ARHGAP40Q5TG30 622 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 LRRC69Q6ZNQ3 347 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 KRT77Q7Z794 578 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.29■□□□□ 0.84
MCF2L-201ENST00000261963 GLB1L2Q8IW92 636 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 SPAG16Q8N0X2 631 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 ARMC10Q8N2F6 343 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 PRSS35Q8N3Z0 413 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 SLC41A2Q96JW4 573 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 MNTQ99583 582 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 KCNG2Q9UJ96 466 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 FER1L5A0AVI2 2057 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 CACNA1CQ13936 2221 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 TRAV8-7A0A075B6U6 113 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 TRBV5-7A0A0A0MS05 114 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 TRAV14DV4A0A0A6YYC5 116 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 KANTRA0A1W2PQU2 76 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 LINC00587B1AMM8 73 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 RBBP9O75884 186 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 CALCBP10092 127 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 PGCP20142 388 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 PLXDC1Q8IUK5 500 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 CARFQ8N187 725 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 BOLLQ8N9W6 283 aaKnown RBP20.29■□□□□ 0.84
MCF2L-201ENST00000261963 OR51A4Q8NGJ6 313 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 OR4C16Q8NGL9 310 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 SLC25A36Q96CQ1 311 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 TMEM185BQ9H7F4 350 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 SEMA5BQ9P283 1151 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 MKL2Q9ULH7 1088 aa20.29■□□□□ 0.84
MCF2L-201ENST00000261963 NUDT21O43809 227 aaKnown RBP20.28■□□□□ 0.84
MCF2L-201ENST00000261963 NPIPB7O75200 414 aa20.28■□□□□ 0.84
MCF2L-201ENST00000261963 PLGP00747 810 aaPredicted RBP20.28■□□□□ 0.84
MCF2L-201ENST00000261963 GP1BBP13224 206 aa20.28■□□□□ 0.84
MCF2L-201ENST00000261963 FOXL2P58012 376 aa20.28■□□□□ 0.84
MCF2L-201ENST00000261963 DHRS7BQ6IAN0 325 aaPredicted RBP20.28■□□□□ 0.84
MCF2L-201ENST00000261963 LANCL3Q6ZV70 420 aa20.28■□□□□ 0.84
MCF2L-201ENST00000261963 STK35Q8TDR2 534 aa20.28■□□□□ 0.84
MCF2L-201ENST00000261963 SFT2D1Q8WV19 159 aa20.28■□□□□ 0.84
MCF2L-201ENST00000261963 MIB2Q96AX9 1013 aa20.28■□□□□ 0.84
MCF2L-201ENST00000261963 SLITRK2Q9H156 845 aa20.28■□□□□ 0.84
MCF2L-201ENST00000261963 NOSIPQ9Y314 301 aaKnown RBP20.28■□□□□ 0.84
MCF2L-201ENST00000261963 TP53BP1Q12888 1972 aaPredicted RBP20.28■□□□□ 0.84
MCF2L-201ENST00000261963 PCNX3Q9H6A9 2034 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms