RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 SOD1P00441 154 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 PLXDC2Q6UX71 529 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 MOB3BQ86TA1 216 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 TXLNGYQ9BZA5 131 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 TRBV5-4A0A0C4DH59 114 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 SOCS6O14544 535 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 BSGP35613 385 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 TATDN3Q17R31 274 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 ZNF626Q68DY1 528 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 ADGRF3Q8IZF5 1079 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 GTPBP8Q8N3Z3 284 aaPredicted RBP12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 OR2A1Q8NGT9 310 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 FUNDC2Q9BWH2 189 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 ISYNA1Q9NPH2 558 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 A0A0U1RQK1 487 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 SERTM1A2A2V5 107 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 ST8SIA5O15466 376 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 TMPRSS11DO60235 418 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 SORBS2O94875 1100 aaKnown RBP12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 CSF3P09919 207 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 CHRNB1P11230 501 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 EMDP50402 254 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 TBRG1Q3YBR2 411 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 ATPAF1Q5TC12 328 aaPredicted RBP12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 CDC20BQ86Y33 519 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 KLHDC8BQ8IXV7 354 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 FOXB1Q99853 325 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 TNFRSF19Q9NS68 423 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 OR5V1Q9UGF6 321 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 EXO1Q9UQ84 846 aaKnown RBP12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 TCRBV5S1A1TA0A578 114 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 HMGN4O00479 90 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 B4GALT3O60512 393 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 PNLIPP16233 465 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 B3GNTL1Q67FW5 361 aaPredicted RBP12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 LCN10Q6JVE6 187 aa12.33□□□□□ -0.44
PDGFRB-201ENST00000261799 DHHO43323 396 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 ZNF691Q5VV52 312 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 NPEPL1Q8NDH3 523 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 MAFIPQ8WZ33 124 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 THAP7Q9BT49 309 aaPredicted RBP12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 MMP11P24347 488 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 LUMP51884 338 aaPredicted RBP12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 PRAMEF5Q5TYX0 476 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 PRAMEF6Q5VXH4 476 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 TSEN54Q7Z6J9 526 aaKnown RBP12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 OR2Y1Q8NGV0 311 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 OR51E1Q8TCB6 317 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 Q96M85 177 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 ZNF251Q9BRH9 671 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 TXNIPQ9H3M7 391 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 ZNF768Q9H5H4 540 aaKnown RBP12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 HSPB11Q9Y547 144 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 ACOD1A6NK06 481 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 CEACAM16Q2WEN9 425 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 AADACL4Q5VUY2 407 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 ZNF511Q8NB15 262 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 OR2AK2Q8NG84 335 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 TMEM106AQ96A25 262 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 OPALINQ96PE5 141 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 PLK3Q9H4B4 646 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 NTNG1Q9Y2I2 539 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 ETV7Q9Y603 341 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 F6UZH7 168 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 LYRM1O43325 122 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 SBK2P0C263 348 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 UBAC2Q8NBM4 344 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 OR8B3Q8NGG8 313 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 OR8B2Q96RD0 313 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 SLCO1B1Q9Y6L6 691 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 EDIL3O43854 480 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 ACTL6AO96019 429 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 KLF3P57682 345 aaPredicted RBP12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 MDGA2Q7Z553 956 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 ARIH2OSQ8N7S6 290 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 ZNF441Q8N8Z8 693 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 ADAT1Q9BUB4 502 aaKnown RBP12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 AMBRA1Q9C0C7 1298 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 CYSLTR2Q9NS75 346 aa12.32□□□□□ -0.44
PDGFRB-201ENST00000261799 IGHV3-64DA0A0J9YX35 117 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 LOC100289279A0A1B0GTE1 492 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 ACOT8O14734 319 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 LIPCP11150 499 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 SLC9A3R2Q15599 337 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 FAM198BQ6UWH4 519 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 SSX8Q7RTT4 187 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 OR6M1Q8NGM8 313 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 IGHV5-10-1A0A0J9YXX1 117 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 ARPC1BO15143 372 aaKnown RBP12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 HOXB5P09067 269 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 RAB4AP20338 218 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 SRD5A2P31213 254 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 TNFAIP6P98066 277 aaPredicted RBP12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 MICBQ29980 383 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 OTUD1Q5VV17 481 aaPredicted RBP12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 LRRC28Q86X40 367 aaPredicted RBP12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 PPIL1Q9Y3C6 166 aa12.31□□□□□ -0.44
PDGFRB-201ENST00000261799 NOTOA8MTQ0 251 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms