RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SPERTQ8NA61 448 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 CCDC107Q8WV48 283 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 SLC25A21Q9BQT8 299 aaPredicted RBP13.67□□□□□ -0.22
DDX56-201ENST00000258772 HHLA2Q9UM44 414 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 H3BUI4 141 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 LDLRAD4O15165 306 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 DOK2O60496 412 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 FBLP22087 321 aaKnown RBP13.66□□□□□ -0.22
DDX56-201ENST00000258772 ARL4DP49703 201 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 SLC26A5P58743 744 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 SPOCK1Q08629 439 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 BAMBIQ13145 260 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 HYAL4Q2M3T9 481 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 C14orf28Q4W4Y0 310 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 LRFN4Q6PJG9 635 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 OGFOD3Q6PK18 319 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 GALNT16Q8N428 558 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 ZNF248Q8NDW4 579 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 TSTD1Q8NFU3 115 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 ASB13Q8WXK3 278 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 CMKLR1Q99788 373 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 TINAGL1Q9GZM7 467 aaPredicted RBP13.66□□□□□ -0.22
DDX56-201ENST00000258772 SLCO5A1Q9H2Y9 848 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 G6PC2Q9NQR9 355 aa13.66□□□□□ -0.22
DDX56-201ENST00000258772 TMEM82A0PJX8 343 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 POM121CA8CG34 1229 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 FTCDNL1E5RQL4 147 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 LMO7DNF2Z398 122 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 M0QYG6 137 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 IL11P20809 199 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 ZP3P21754 424 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 DNASE1L1P49184 302 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 OR1D5P58170 312 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 ADGRE4PQ86SQ3 457 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 CDH26Q8IXH8 852 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 C12orf45Q8N5I9 185 aaPredicted RBP13.65□□□□□ -0.22
DDX56-201ENST00000258772 OR13C3Q8NGS6 347 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 LINC00052Q96N35 136 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 VN1R1Q9GZP7 353 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 MYEF2Q9P2K5 600 aaKnown RBP13.65□□□□□ -0.22
DDX56-201ENST00000258772 MKL2Q9ULH7 1088 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 MS4A18H0YCH9 400 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 ADAM10O14672 748 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 SDC3O75056 442 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 ZNF217O75362 1048 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 AMY2AP04746 511 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 ISG15P05161 165 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 NAT2P11245 290 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 ZNF823P16415 610 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 ARRB1P49407 418 aaPredicted RBP13.65□□□□□ -0.22
DDX56-201ENST00000258772 SORDQ00796 357 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 PMPCAQ10713 525 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 GK2Q14410 553 aaPredicted RBP13.65□□□□□ -0.22
DDX56-201ENST00000258772 MS4A18Q3C1V0 323 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 OR10K2Q6IF99 312 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 JAGN1Q8N5M9 183 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 SLC26A10Q8NG04 563 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 MFFQ9GZY8 342 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 ZMAT3Q9HA38 289 aaKnown RBP13.65□□□□□ -0.22
DDX56-201ENST00000258772 OR52A1Q9UKL2 312 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 EYSQ5T1H1 3165 aa13.65□□□□□ -0.22
DDX56-201ENST00000258772 A0A0A6YYH2 397 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 LOC107986453A0A1B0GWG9 222 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 A6NJ64 397 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 RFPL4AA6NLU0 287 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 OR6C76A6NM76 312 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 METTL12A8MUP2 240 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 RFPL4AL1F8VTS6 287 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 ALOX12BO75342 701 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 CYB5AP00167 134 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 ZNF735P0CB33 412 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 RPA2P15927 270 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 ACHEP22303 614 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 PTGS2P35354 604 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 MOGAT2Q3SYC2 334 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 LY6G6FQ5SQ64 297 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 C1orf189Q5VU69 101 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 C5orf46Q6UWT4 87 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 DCXRQ7Z4W1 244 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 TTYH1Q9H313 450 aaPredicted RBP13.64□□□□□ -0.23
DDX56-201ENST00000258772 LOC390937A0A1W2PQ73 354 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 AQP8O94778 261 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 FOLR1P15328 257 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 CFHR1Q03591 330 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 FMODQ06828 376 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 SQSTM1Q13501 440 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 TDGQ13569 410 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 UBXN2BQ14CS0 331 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 NR0B2Q15466 257 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 PCK2Q16822 640 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 TUSC1Q2TAM9 212 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 C1orf100Q5SVJ3 147 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 ZNF660Q6AZW8 331 aaPredicted RBP13.64□□□□□ -0.23
DDX56-201ENST00000258772 ZNF704Q6ZNC4 412 aaPredicted RBP13.64□□□□□ -0.23
DDX56-201ENST00000258772 LANCL3Q6ZV70 420 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 TMED4Q7Z7H5 227 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 LYPD6Q86Y78 171 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 OR6K3Q8NGY3 331 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 ST7LQ8TDW4 575 aa13.64□□□□□ -0.23
DDX56-201ENST00000258772 NPAS1Q99742 590 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms