RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 NSA2O95478 260 aaKnown RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 PMS2P2O95744 297 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 LINC00271P0C7V0 271 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SMIM10L1P0DMW3 83 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 RPS4Y1P22090 263 aaKnown RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 H2BFSP57053 126 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ZNF117Q03924 483 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 IL10RAQ13651 578 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SMCO1Q147U7 214 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ZNF141Q15928 474 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ELFN2Q5R3F8 820 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ANKRD16Q6P6B7 361 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ZNF704Q6ZNC4 412 aaPredicted RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 ADGRE4PQ86SQ3 457 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 GALNT16Q8N428 558 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 GVQW1Q8N7I0 195 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 OTOSQ8NHW6 89 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ASB17Q8WXJ9 295 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 TTC9Q92623 222 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ELSPBP1Q96BH3 223 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SMIM10Q96HG1 83 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ZNF75AQ96N20 296 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 LRFN5Q96NI6 719 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SLC46A1Q96NT5 459 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 PRRT1Q99946 306 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 CST11Q9H112 138 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 TMEM231Q9H6L2 316 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ZNF230Q9UIE0 474 aaPredicted RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 HIF3AQ9Y2N7 669 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 IGHV5-51A0A0C4DH38 117 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 TMEM272A0A1B0GTI8 110 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 VSTM2BA6NLU5 285 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 CTDSPLO15194 276 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ZNF749O43361 778 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 TNFSF14O43557 240 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ALOX12BO75342 701 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 PRH1P02810 166 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 IL5P05113 134 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 S100A6P06703 90 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 NMBP08949 121 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 UBBP0CG47 229 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 UBCP0CG48 685 aaKnown RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 GNB3P16520 340 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 GABRG2P18507 467 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 PPICP45877 212 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 NPY4RP50391 375 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ZNF41P51814 821 aaPredicted RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 MGAT2Q10469 447 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 BAMBIQ13145 260 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SHHQ15465 462 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 CLVS2Q5SYC1 327 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 TMEM244Q5VVB8 128 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 FAM122CQ6P4D5 195 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SEZ6L2Q6UXD5 910 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 FJX1Q86VR8 437 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ANGPTL5Q86XS5 388 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ADGRG3Q86Y34 549 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 GRAMD2AQ8IUY3 354 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 PNLDC1Q8NA58 520 aaKnown RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 OR10R2Q8NGX6 335 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 HAVCR2Q8TDQ0 301 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ADAMTS18Q8TE60 1221 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ZNF775Q96BV0 537 aaPredicted RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 FOXRED1Q96CU9 486 aaPredicted RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 OR8B4Q96RC9 309 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SLC25A21Q9BQT8 299 aaPredicted RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 SMIM3Q9BZL3 60 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SLC19A3Q9BZV2 496 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 PPP4R1LQ9P1A2 415 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 KIF25Q9UIL4 384 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 LRP12Q9Y561 859 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 HRH3Q9Y5N1 445 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SHOXO15266 292 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 FOXS1O43638 330 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 FBXO24O75426 580 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 LYPD3O95274 346 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 HEXBP07686 556 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 GAAP10253 952 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 GABRA1P14867 456 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 BDKRB2P30411 391 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 HRH1P35367 487 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 GPR3P46089 330 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 CSNK1EP49674 416 aaKnown RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 SLC25A1P53007 311 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 BIDP55957 195 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 RPS27AP62979 156 aaKnown RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 UBA52P62987 128 aaKnown RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 EGR3Q06889 387 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 DHRS2Q13268 280 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 C2orf68Q2NKX9 166 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 PRTGQ2VWP7 1150 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 LINC01590Q5TEZ4 76 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 EEF1A1P5Q5VTE0 462 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 KIAA0895LQ68EN5 471 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 ATG4DQ86TL0 474 aaPredicted RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 BPHLQ86WA6 291 aaPredicted RBP4.28□□□□□ -1.72
USP44-201ENST00000258499 CDH26Q8IXH8 852 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 SPICQ8N5J4 248 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 OR4K17Q8NGC6 315 aa4.28□□□□□ -1.72
USP44-201ENST00000258499 TMED6Q8WW62 240 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms