RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 GLRA1P23415 457 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 RBP2P50120 134 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 RAB5CP51148 216 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 UBE2KP61086 200 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 TMEM196Q5HYL7 178 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 CISD2Q8N5K1 135 aaKnown RBP7.94□□□□□ -1.14
PTCD3-201ENST00000254630 IER2Q9BTL4 223 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 GABARAPL3Q9BY60 117 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 CCDC187A0A096LP49 1063 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 NME2P22392 152 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 PRPH2P23942 346 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 PCSK6P29122 969 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 SRP9P49458 86 aaKnown RBP7.94□□□□□ -1.14
PTCD3-201ENST00000254630 SUB1P53999 127 aaKnown RBP eCLIP7.94□□□□□ -1.142e-11■■■■■ 44.3
PTCD3-201ENST00000254630 RPL11P62913 178 aaKnown RBP7.94□□□□□ -1.14
PTCD3-201ENST00000254630 FZD2Q14332 565 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 HMGN3Q15651 99 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 RTL8BQ17RB0 113 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 ADPRMQ3LIE5 342 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 LAIR1Q6GTX8 287 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 TFAP2EQ6VUC0 442 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 IL34Q6ZMJ4 242 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 TMEM217Q8N7C4 229 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 DRAXINQ8NBI3 349 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-201ENST00000254630 NOXO1Q8NFA2 376 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 C16orf52Q8NHV5 167 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 MENTQ9BUN1 341 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 ZCCHC4Q9H5U6 513 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 ACER3Q9NUN7 267 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 NDRG3Q9UGV2 375 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 COL24A1Q17RW2 1714 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 TRGV8A0A0C4DH27 118 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 XRCC2O43543 280 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 PMS2P2O95744 297 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 FABP1P07148 127 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 POU3F3P20264 500 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-201ENST00000254630 LAP3P28838 519 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 HOXD11P31277 338 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-201ENST00000254630 SERPINF1P36955 418 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 SLC19A1P41440 591 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 RNF4P78317 190 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 CORO6Q6QEF8 472 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 FAM109AQ8N4B1 249 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 OR51F2Q8NH61 342 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 SLCO4A1Q96BD0 722 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 MVB12AQ96EY5 273 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 SAMD10Q9BYL1 202 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 PLEKHF2Q9H8W4 249 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 BIN3Q9NQY0 253 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 SLC39A9Q9NUM3 307 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 COL5A3P25940 1745 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-201ENST00000254630 POM121CA8CG34 1229 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 VAMP5O95183 116 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 CLEC2LP0C7M8 214 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 FAM157BP0CG42 384 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 MGST1P10620 155 aaKnown RBP7.93□□□□□ -1.14
PTCD3-201ENST00000254630 RPL18Q07020 188 aaKnown RBP7.93□□□□□ -1.14
PTCD3-201ENST00000254630 HNF4GQ14541 408 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 KHDC1LQ5JSQ8 128 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 USP51Q70EK9 711 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 OR6K3Q8NGY3 331 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 NUDT9Q9BW91 350 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 POLDIP2Q9Y2S7 368 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 ABCD4O14678 606 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 GABRG2P18507 467 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 DSCR4P56555 118 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-201ENST00000254630 SYT14P1Q58G82 188 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 TP53I13Q8NBR0 393 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-201ENST00000254630 RHOXF1Q8NHV9 184 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 SEC22AQ96IW7 307 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 TEAD3Q99594 435 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 MKRN2Q9H000 416 aaKnown RBP7.93□□□□□ -1.14
PTCD3-201ENST00000254630 SHARPINQ9H0F6 387 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 FBXL2Q9UKC9 423 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 LTBP4Q8N2S1 1624 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 TRBV5-4A0A0C4DH59 114 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 OR6C65A6NJZ3 312 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 METTL12A8MUP2 240 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 DVL1O14640 695 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 GUSBP08236 651 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 OR10J4P0C629 311 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 PSMB1P20618 241 aaKnown RBP7.93□□□□□ -1.14
PTCD3-201ENST00000254630 RFX2P48378 723 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 DVL1P1P54792 670 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-201ENST00000254630 ACKR1Q16570 336 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 GFRALQ6UXV0 394 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 ZDHHC23Q8IYP9 409 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 OR13F1Q8NGS4 319 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 OR10K1Q8NGX5 313 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 TCEAL2Q9H3H9 227 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-201ENST00000254630 R4GMQ9 66 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 PLXNB2O15031 1838 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 ATAD5Q96QE3 1844 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 CLEC3BP05452 202 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 CLINT1Q14677 625 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 BATFQ16520 125 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 NHSL2Q5HYW2 709 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 ZNF626Q68DY1 528 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 OR11A1Q9GZK7 315 aa7.93□□□□□ -1.14
PTCD3-201ENST00000254630 UFSP2Q9NUQ7 469 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms