RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 JMJD8Q96S16 334 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 SH3GL1Q99961 368 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 GAL3ST1Q99999 423 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 KCNN2Q9H2S1 579 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 ZDHHC8Q9ULC8 765 aa8.71□□□□□ -1.02
VPS50-201ENST00000251739 PLSCR5A0PG75 271 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 BBIP1A8MTZ0 92 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 FAM220BPB1ANY3 271 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 TPD52L2O43399 206 aaKnown RBP8.7□□□□□ -1.02
VPS50-201ENST00000251739 SPRY3O43610 288 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 PRSS23O95084 383 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 SCG5P05408 212 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 COX5BP10606 129 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 MSR1P21757 451 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 ZFP36P26651 326 aaKnown RBP8.7□□□□□ -1.02
VPS50-201ENST00000251739 KDELR2P33947 212 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 PCBD1P61457 104 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 UBA52P62987 128 aaKnown RBP8.7□□□□□ -1.02
VPS50-201ENST00000251739 SLC3A1Q07837 685 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 CDK5R2Q13319 367 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 TOP3AQ13472 1001 aaPredicted RBP8.7□□□□□ -1.02
VPS50-201ENST00000251739 ZMAT1Q5H9K5 638 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 UNQ6126/PRO20091Q6UXV3 157 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 Q6ZR03 302 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 ABHD4Q8TB40 342 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 NANPQ8TBE9 248 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 C10orf82Q8WW14 230 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 CCL17Q92583 94 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 NSMAFQ92636 917 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 GCDHQ92947 438 aaPredicted RBP8.7□□□□□ -1.02
VPS50-201ENST00000251739 BPIFA2Q96DR5 249 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 SIGLEC11Q96RL6 698 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 DIRC2Q96SL1 478 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 ECSITQ9BQ95 431 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 TMEM120AQ9BXJ8 343 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 EGLN1Q9GZT9 426 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 POFUT1Q9H488 388 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 MSL2Q9HCI7 577 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 POLE4Q9NR33 117 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 EIF3KQ9UBQ5 218 aaKnown RBP8.7□□□□□ -1.02
VPS50-201ENST00000251739 TIMM10BQ9Y5J6 103 aa8.7□□□□□ -1.02
VPS50-201ENST00000251739 A6NIZ1 184 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 A8MXK9 166 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 F5H0A9 414 aaPredicted RBP8.69□□□□□ -1.02
VPS50-201ENST00000251739 MRASO14807 208 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 FFAR1O14842 300 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 IFNA14P01570 189 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 IFI30P13284 250 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 ZNF26P17031 533 aaPredicted RBP8.69□□□□□ -1.02
VPS50-201ENST00000251739 KITLGP21583 273 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 CTXN1P60606 82 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 RAP1BP61224 184 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 RAP1AP62834 184 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 LCN2P80188 198 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 ST3GAL3Q11203 375 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 PSG7Q13046 419 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 KLF10Q13118 480 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 ANKDD1AQ495B1 522 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 TMEM155Q4W5P6 130 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 LRRC23Q53EV4 343 aaPredicted RBP8.69□□□□□ -1.02
VPS50-201ENST00000251739 AWAT1Q58HT5 328 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 MTX3Q5HYI7 312 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 CGB2Q6NT52 195 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 DOK3Q7L591 496 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 FAM122BQ7Z309 247 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 IGFN1Q86VF2 1251 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 NRMQ8IXM6 262 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 BPIFB2Q8N4F0 458 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 ZNF283Q8N7M2 679 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 C3orf56Q8N813 242 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 NPEPL1Q8NDH3 523 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 SGMS2Q8NHU3 365 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 C4orf45Q96LM5 186 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 C1orf147Q96MC9 270 aaPredicted RBP8.69□□□□□ -1.02
VPS50-201ENST00000251739 RBP7Q96R05 134 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 WACQ9BTA9 647 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 C7orf69Q9H7B7 122 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 VIPAS39Q9H9C1 493 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 ELOVL3Q9HB03 270 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 SAR1AQ9NR31 198 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 MRGBPQ9NV56 204 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 TBCCD1Q9NVR7 557 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 PURGQ9UJV8 347 aaKnown RBP8.69□□□□□ -1.02
VPS50-201ENST00000251739 NDRG4Q9ULP0 352 aaKnown RBP8.69□□□□□ -1.02
VPS50-201ENST00000251739 SNX13Q9Y5W8 968 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 NPTNQ9Y639 398 aa8.69□□□□□ -1.02
VPS50-201ENST00000251739 TRAV27A0A087WT01 109 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 C12orf71A8MTZ7 269 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 TRAPPC2LH3BP13 241 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 CDC42EP2O14613 210 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 FOXH1O75593 365 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 ZNF12P17014 697 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 TUBG1P23258 451 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 RBMXP38159 391 aaKnown RBP8.68□□□□□ -1.02
VPS50-201ENST00000251739 SLC9A3P48764 834 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 SELENOWP63302 87 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 TNFAIP6P98066 277 aaPredicted RBP8.68□□□□□ -1.02
VPS50-201ENST00000251739 PRKCDQ05655 676 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 ZMYND11Q15326 602 aa8.68□□□□□ -1.02
VPS50-201ENST00000251739 MESTQ5EB52 335 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms