RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 GAL3ST1Q99999 423 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 HOPXQ9BPY8 73 aaPredicted RBP17.87■□□□□ 0.45
NEDD8-201ENST00000250495 NDEL1Q9GZM8 345 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 POLE4Q9NR33 117 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 TUBG2Q9NRH3 451 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 ARMCX1Q9P291 453 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 NBEAL1Q6ZS30 2694 aa17.87■□□□□ 0.45
NEDD8-201ENST00000250495 ZSCAN5BA6NJL1 495 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 XKRYO14609 159 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 AVPP01185 164 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 CD14P08571 375 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 COX5BP10606 129 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 EPHA1P21709 976 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 GATA3P23771 443 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 ZBED5Q49AG3 693 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 MTX3Q5HYI7 312 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 TMEM255AQ5JRV8 349 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 DCAF12L2Q5VW00 463 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 C1orf229Q6ZS94 237 aaPredicted RBP17.86■□□□□ 0.45
NEDD8-201ENST00000250495 TMPRSS11FQ6ZWK6 438 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 USP43Q70EL4 1123 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 TREML1Q86YW5 311 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 FAM156AQ8NDB6 213 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 OR13C2Q8NGS9 318 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 JMJD8Q96S16 334 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 TMPRSS13Q9BYE2 586 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 TBCCD1Q9NVR7 557 aa17.86■□□□□ 0.45
NEDD8-201ENST00000250495 LOC105371242A0A075B767 164 aa17.85■□□□□ 0.45
NEDD8-201ENST00000250495 TIMM8AO60220 97 aaPredicted RBP17.85■□□□□ 0.45
NEDD8-201ENST00000250495 ABHD16AO95870 558 aa17.85■□□□□ 0.45
NEDD8-201ENST00000250495 CD55P08174 381 aa17.85■□□□□ 0.45
NEDD8-201ENST00000250495 GSTM3P21266 225 aa17.85■□□□□ 0.45
NEDD8-201ENST00000250495 SCRN3Q0VDG4 424 aa17.85■□□□□ 0.45
NEDD8-201ENST00000250495 TBPL2Q6SJ96 375 aa17.85■□□□□ 0.45
NEDD8-201ENST00000250495 CYP4Z1Q86W10 505 aa17.85■□□□□ 0.45
NEDD8-201ENST00000250495 NPEPL1Q8NDH3 523 aa17.85■□□□□ 0.45
NEDD8-201ENST00000250495 ANKRD19PQ9H560 264 aa17.85■□□□□ 0.45
NEDD8-201ENST00000250495 MSL2Q9HCI7 577 aa17.85■□□□□ 0.45
NEDD8-201ENST00000250495 GMPR2Q9P2T1 348 aaKnown RBP17.85■□□□□ 0.45
NEDD8-201ENST00000250495 TMEM5Q9Y2B1 443 aa17.85■□□□□ 0.45
NEDD8-201ENST00000250495 ISPDA4D126 451 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 H7C1C5 153 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 TRIM77I1YAP6 450 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 SCG5P05408 212 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 COX4I1P13073 169 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 HILS1P60008 231 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 LCN6P62502 163 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 TNFAIP6P98066 277 aaPredicted RBP17.84■□□□□ 0.45
NEDD8-201ENST00000250495 PSG7Q13046 419 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 C1QL2Q7Z5L3 287 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 NANPQ8TBE9 248 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 ST7LQ8TDW4 575 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 HSH2DQ96JZ2 352 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 Q96M85 177 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 EFCAB1Q9HAE3 211 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 EMC7Q9NPA0 242 aa17.84■□□□□ 0.45
NEDD8-201ENST00000250495 PRSS37A4D1T9 235 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 CDC42EP2O14613 210 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 SGCEO43556 437 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 CCDC22O60826 627 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 PRSS23O95084 383 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 SERPINA1P01009 418 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 TNFSF4P23510 183 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 GPR4P46093 362 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 SLC7A2P52569 658 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 CDK5R2Q13319 367 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 COG8Q96MW5 612 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 ZNF570Q96NI8 536 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 C7orf69Q9H7B7 122 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 NMNAT1Q9HAN9 279 aaPredicted RBP17.83■□□□□ 0.44
NEDD8-201ENST00000250495 UBAP1Q9NZ09 502 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 ADAM18Q9Y3Q7 739 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 NPTNQ9Y639 398 aa17.83■□□□□ 0.44
NEDD8-201ENST00000250495 NME4O00746 187 aa17.82■□□□□ 0.44
NEDD8-201ENST00000250495 DOK2O60496 412 aa17.82■□□□□ 0.44
NEDD8-201ENST00000250495 RGS9O75916 674 aaPredicted RBP17.82■□□□□ 0.44
NEDD8-201ENST00000250495 TNFRSF1AP19438 455 aa17.82■□□□□ 0.44
NEDD8-201ENST00000250495 HTR5AP47898 357 aa17.82■□□□□ 0.44
NEDD8-201ENST00000250495 ACTG1P63261 375 aa17.82■□□□□ 0.44
NEDD8-201ENST00000250495 TRPM8Q7Z2W7 1104 aa17.82■□□□□ 0.44
NEDD8-201ENST00000250495 FAM122BQ7Z309 247 aa17.82■□□□□ 0.44
NEDD8-201ENST00000250495 FAM216AQ8WUB2 273 aa17.82■□□□□ 0.44
NEDD8-201ENST00000250495 FAM162AQ96A26 154 aa17.82■□□□□ 0.44
NEDD8-201ENST00000250495 SAMD8Q96LT4 415 aa17.82■□□□□ 0.44
NEDD8-201ENST00000250495 SUCNR1Q9BXA5 334 aa17.82■□□□□ 0.44
NEDD8-201ENST00000250495 PURGQ9UJV8 347 aaKnown RBP17.82■□□□□ 0.44
NEDD8-201ENST00000250495 FAM32AQ9Y421 112 aaKnown RBP17.82■□□□□ 0.44
NEDD8-201ENST00000250495 ENPP4Q9Y6X5 453 aa17.82■□□□□ 0.44
NEDD8-201ENST00000250495 ARHGAP32A7KAX9 2087 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 DYSFO75923 2080 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 TEX13CA0A0J9YWL9 993 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 PTP4A3O75365 173 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 FOXH1O75593 365 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 NDUFB2O95178 105 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 KITLGP21583 273 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 CFPP27918 469 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 GSK3BP49841 420 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 AQP6Q13520 282 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 MESTQ5EB52 335 aa17.81■□□□□ 0.44
NEDD8-201ENST00000250495 GPR139Q6DWJ6 353 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms