RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 TINAGQ9UJW2 476 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 COPS3Q9UNS2 423 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 POLR1DQ9Y2S0 133 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 MEMO1Q9Y316 297 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 TIMM10BQ9Y5J6 103 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 LHFPL6Q9Y693 200 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 POLEQ07864 2286 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 ATRXP46100 2492 aa11.36□□□□□ -0.59
LSM8-201ENST00000249299 ACOD1A6NK06 481 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ZNHIT1O43257 154 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 MPZL1O95297 269 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 OPRL1P41146 370 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 MAP2K4P45985 399 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 GBX2P52951 348 aaPredicted RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 SIRPAP78324 504 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ARF1P84077 181 aaKnown RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 FOXF2Q12947 444 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 TPBGQ13641 420 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 EIF2B1Q14232 305 aaKnown RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 MED22Q15528 200 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 NEDD8Q15843 81 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 SLC36A2Q495M3 483 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ZNF544Q6NX49 715 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 LYPD4Q6UWN0 246 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 DCXRQ7Z4W1 244 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 GPR141Q7Z602 305 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 MRGPRGQ86SM5 289 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 THEM6Q8WUY1 208 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 NANOS1Q8WY41 292 aaKnown RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 BCL7BQ9BQE9 202 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ZNF416Q9BWM5 594 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 FAM192AQ9GZU8 254 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 HDHD2Q9H0R4 259 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 OR10A4Q9H209 315 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 C12orf49Q9H741 205 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ASH2LQ9UBL3 628 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 GDF2Q9UK05 429 aaPredicted RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 FBXL3Q9UKT7 428 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 A0A1B0GUH1 482 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ZNF878C9JN71 531 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ZNF701M0R085 212 aaPredicted RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 DVL2O14641 736 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 INMTO95050 263 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ABHD16AO95870 558 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 GPANK1O95872 356 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 LCKP06239 509 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ITGA5P08648 1049 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 COX5BP10606 129 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 CPEP16870 476 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 PSMB1P20618 241 aaKnown RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 GALP22466 123 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 EDNRAP25101 427 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ARR3P36575 388 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 RIDAP52758 137 aaKnown RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 GRB2P62993 217 aaKnown RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 DBPQ10586 325 aaPredicted RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 GTF3C1Q12789 2109 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 RAB39AQ14964 217 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 TRAM1Q15629 374 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 MEP1BQ16820 701 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 TIMM50Q3ZCQ8 353 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ARMCX4Q5H9R4 360 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 OR2G6Q5TZ20 316 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 RPL22L1Q6P5R6 122 aaKnown RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 VWA1Q6PCB0 445 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 SSX6Q7RTT6 188 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 SLC16A14Q7RTX9 510 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 P2RY8Q86VZ1 359 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ALDH16A1Q8IZ83 802 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 NAXEQ8NCW5 288 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 OR1K1Q8NGR3 316 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 RPS4Y2Q8TD47 263 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 SPRYD4Q8WW59 207 aaPredicted RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 BCL2L2Q92843 193 aaPredicted RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 ITFG2Q969R8 447 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 SLAMF6Q96DU3 332 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 POM121Q96HA1 1249 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 C4orf36Q96KX1 117 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 OR5M11Q96RB7 305 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 TBX5Q99593 518 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 COQ7Q99807 217 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 GALNT8Q9NY28 637 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 ELOVL5Q9NYP7 299 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 JKAMPQ9P055 326 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 PRSS50Q9UI38 385 aa11.35□□□□□ -0.59
LSM8-201ENST00000249299 MRM2Q9UI43 246 aaKnown RBP11.35□□□□□ -0.59
LSM8-201ENST00000249299 EPG5Q9HCE0 2579 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 SVILO95425 2214 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 RP1L1Q8IWN7 2480 aaPredicted RBP11.34□□□□□ -0.59
LSM8-201ENST00000249299 TRGV8A0A0C4DH27 118 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 A8MXE2 369 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 J3QLW9 94 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 CCRL2O00421 344 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 OGG1O15527 345 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 PLPP2O43688 288 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 GPRIN2O60269 458 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 UBL3O95164 117 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 IGHV3-9P01782 118 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 ZNF19P17023 458 aa11.34□□□□□ -0.59
LSM8-201ENST00000249299 PSMA1P25786 263 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms