RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 COL7A1Q02388 2944 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 KIR2DS1A0A191URI9 304 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 CEACAM18A8MTB9 384 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 EVPLLA8MZ36 301 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 TMEM178BH3BS89 294 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 M0QX08 132 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 SURF4O15260 269 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 THY1P04216 161 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 RPS2P15880 293 aaKnown RBP6.95□□□□□ -1.3
IFT43-201ENST00000238628 HOXB9P17482 250 aaPredicted RBP6.95□□□□□ -1.3
IFT43-201ENST00000238628 GPX2P18283 190 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 FUT1P19526 365 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 PPIBP23284 216 aaKnown RBP6.95□□□□□ -1.3
IFT43-201ENST00000238628 CPT2P23786 658 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 GUCA1AP43080 201 aaPredicted RBP6.95□□□□□ -1.3
IFT43-201ENST00000238628 ZNF133P52736 654 aaPredicted RBP6.95□□□□□ -1.3
IFT43-201ENST00000238628 UGT2B15P54855 530 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 PROK1P58294 105 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 PAX2Q02962 417 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 RPL18Q07020 188 aaKnown RBP6.95□□□□□ -1.3
IFT43-201ENST00000238628 DUSP7Q16829 419 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 TTMPQ5BVD1 217 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 LRIF1Q5T3J3 769 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 ARL9Q6T311 187 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 BRD3OSQ6XYD6 125 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 HDDC2Q7Z4H3 204 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 MSRB3Q8IXL7 192 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 OR6T1Q8NGN1 323 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 LINC01006Q8NI28 216 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 ADAMTS16Q8TE57 1224 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 ITLN1Q8WWA0 313 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 NABP1Q96AH0 204 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 OR52B2Q96RD2 323 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 SEPHS2Q99611 448 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 OR2H1Q9GZK4 316 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 WNT5BQ9H1J7 359 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 CENPHQ9H3R5 247 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 TMEM38AQ9H6F2 299 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 MARCH7Q9H992 704 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 TMEM165Q9HC07 324 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 NOX4Q9NPH5 578 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 INIPQ9NRY2 104 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 MAN2C1Q9NTJ4 1040 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 VAPAQ9P0L0 249 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 STX18Q9P2W9 335 aaKnown RBP6.95□□□□□ -1.3
IFT43-201ENST00000238628 MIOXQ9UGB7 285 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 SLC7A7Q9UM01 511 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 ANGPT4Q9Y264 503 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 UGT2A1Q9Y4X1 527 aa6.95□□□□□ -1.3
IFT43-201ENST00000238628 IGKV1D-43A0A0B4J1Z2 117 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 IGHV2-70DA0A0C4DH43 119 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 LCE6AA0A183 80 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 TRAPPC13A5PLN9 417 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 ICMTO60725 284 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 SNNO75324 88 aaPredicted RBP6.94□□□□□ -1.3
IFT43-201ENST00000238628 ZNF205O95201 554 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 LYPD3O95274 346 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 OPN1SWP03999 348 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 VIMP08670 466 aaKnown RBP6.94□□□□□ -1.3
IFT43-201ENST00000238628 CST2P09228 141 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 GSTM3P21266 225 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 TUBG1P23258 451 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 LAP3P28838 519 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 AQP2P41181 271 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 DAP3P51398 398 aaKnown RBP6.94□□□□□ -1.3
IFT43-201ENST00000238628 BPIFB3P59826 476 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 PCBD1P61457 104 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 VSNL1P62760 191 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 FMODQ06828 376 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 CD47Q08722 323 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 NPTX1Q15818 432 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 PAGE3Q5JUK9 113 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 ZNF774Q6NX45 483 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 SLC27A4Q6P1M0 643 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 SLC25A47Q6Q0C1 308 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 Q6ZR03 302 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 KLBQ86Z14 1044 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 RBM45Q8IUH3 476 aaKnown RBP6.94□□□□□ -1.3
IFT43-201ENST00000238628 TMEM86BQ8N661 226 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 ANKRD42Q8N9B4 389 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 ATG16L2Q8NAA4 619 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 VANGL1Q8TAA9 524 aaPredicted RBP6.94□□□□□ -1.3
IFT43-201ENST00000238628 HDAC2Q92769 488 aaKnown RBP6.94□□□□□ -1.3
IFT43-201ENST00000238628 CMBLQ96DG6 245 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 PLEKHA8Q96JA3 519 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 MPP4Q96JB8 637 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 FAM71F1Q96KD3 344 aaPredicted RBP6.94□□□□□ -1.3
IFT43-201ENST00000238628 MAGEB18Q96M61 343 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 RBP7Q96R05 134 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 OR2V2Q96R30 315 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 NUDT16L1Q9BRJ7 211 aaKnown RBP6.94□□□□□ -1.3
IFT43-201ENST00000238628 CHIAQ9BZP6 476 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 SMURF2Q9HAU4 748 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 MEPEQ9NQ76 525 aaPredicted RBP6.94□□□□□ -1.3
IFT43-201ENST00000238628 TUBG2Q9NRH3 451 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 TBCCD1Q9NVR7 557 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.94□□□□□ -1.3
IFT43-201ENST00000238628 CORO2BQ9UQ03 480 aa6.94□□□□□ -1.3
IFT43-201ENST00000238628 TET2Q6N021 2002 aaPredicted RBP6.94□□□□□ -1.3
IFT43-201ENST00000238628 GMNCA6NCL1 334 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms