RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 PRAMEF7Q5VXH5 474 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 OR5H2Q8NGV7 314 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 THAP3Q8WTV1 239 aaPredicted RBP13.18□□□□□ -0.3
PRDM4-201ENST00000228437 FGGYQ96C11 551 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 SSX3Q99909 188 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 ZNF251Q9BRH9 671 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 TBL1XR1Q9BZK7 514 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 ZCCHC4Q9H5U6 513 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 C14orf166Q9Y224 244 aaKnown RBP13.18□□□□□ -0.3
PRDM4-201ENST00000228437 H0YGG7 62 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 CTSEP14091 401 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 OMGP23515 440 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 ARF3P61204 181 aaPredicted RBP13.18□□□□□ -0.3
PRDM4-201ENST00000228437 WDR38Q5JTN6 314 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 SLC16A9Q7RTY1 509 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 PHYHIPQ92561 330 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 SERINC2Q96SA4 455 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 TCEAL7Q9BRU2 100 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 GSN-AS1Q9NRJ2 163 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 DAPP1Q9UN19 280 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 BRWD3Q6RI45 1802 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 CRTAPO75718 401 aaPredicted RBP13.18□□□□□ -0.3
PRDM4-201ENST00000228437 ACAA1P09110 424 aaPredicted RBP13.18□□□□□ -0.3
PRDM4-201ENST00000228437 CD96P40200 585 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 ASCL1P50553 236 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 CYCSP99999 105 aaKnown RBP13.18□□□□□ -0.3
PRDM4-201ENST00000228437 ANKRD16Q6P6B7 361 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 LYG2Q86SG7 212 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 OR2L13Q8N349 312 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 CCL4L1Q8NHW4 92 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 PATE1Q8WXA2 126 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 SUCNR1Q9BXA5 334 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 HHLA2Q9UM44 414 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 MED12Q93074 2177 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 HIDE1A8MVS5 230 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 SCGNO76038 276 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 FOSL1P15407 271 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 MUC1P15941 1255 aaPredicted RBP13.18□□□□□ -0.3
PRDM4-201ENST00000228437 MST1P26927 711 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 PPM1AP35813 382 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 GUCA1AP43080 201 aaPredicted RBP13.18□□□□□ -0.3
PRDM4-201ENST00000228437 SLC6A9P48067 706 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 ZP2Q05996 745 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 MEF2DQ14814 521 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 MLF2Q15773 248 aaPredicted RBP13.18□□□□□ -0.3
PRDM4-201ENST00000228437 ABCA11PQ4W5N1 156 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 MRGPREQ86SM8 312 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 SHISA5Q8N114 240 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 TMEM104Q8NE00 496 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 CDC6Q99741 560 aa13.18□□□□□ -0.3
PRDM4-201ENST00000228437 EXOSC3Q9NQT5 275 aaKnown RBP13.18□□□□□ -0.3
PRDM4-201ENST00000228437 K7EPK0 472 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 GREM1O60565 184 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 IL12BP29460 328 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 RPL7L1Q6DKI1 246 aaKnown RBP13.17□□□□□ -0.3
PRDM4-201ENST00000228437 JMJD6Q6NYC1 403 aaPredicted RBP13.17□□□□□ -0.3
PRDM4-201ENST00000228437 HIST2H3AQ71DI3 136 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 FAM71E2Q8N5Q1 922 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 OR2L8Q8NGY9 312 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 MMABQ96EY8 250 aaPredicted RBP13.17□□□□□ -0.3
PRDM4-201ENST00000228437 MAP3K3Q99759 626 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 NRSN2Q9GZP1 204 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 MRPS2Q9Y399 296 aaKnown RBP13.17□□□□□ -0.3
PRDM4-201ENST00000228437 YIF1AO95070 293 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 AHSA1O95433 338 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 THBS1P07996 1170 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 CT62P0C5K7 136 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 RCC1P18754 421 aaPredicted RBP13.17□□□□□ -0.3
PRDM4-201ENST00000228437 GLP1RP43220 463 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 EEF1A1P68104 462 aaKnown RBP13.17□□□□□ -0.3
PRDM4-201ENST00000228437 S100A12P80511 92 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 RHEBQ15382 184 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 IAH1Q2TAA2 248 aaPredicted RBP13.17□□□□□ -0.3
PRDM4-201ENST00000228437 CHRFAM7AQ494W8 412 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 NKAIN2Q5VXU1 208 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 CARD17Q5XLA6 110 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 C5orf46Q6UWT4 87 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 MFSD9Q8NBP5 474 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 ADAD2Q8NCV1 583 aaKnown RBP13.17□□□□□ -0.3
PRDM4-201ENST00000228437 OR4C3Q8NH37 302 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 FAM213BQ8TBF2 198 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 SLC22A18Q96BI1 424 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 RHOVQ96L33 236 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 VSX1Q9NZR4 365 aaPredicted RBP13.17□□□□□ -0.3
PRDM4-201ENST00000228437 C19orf53Q9UNZ5 99 aaPredicted RBP13.17□□□□□ -0.3
PRDM4-201ENST00000228437 SLC22A7Q9Y694 548 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 RALGAPA2Q2PPJ7 1873 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 IGKV1-8A0A0C4DH67 115 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 A0A1W2PPV9 198 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 SYT7O43581 403 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 HSD11B1P28845 292 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 MLC1Q15049 377 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 ZNF425Q6IV72 752 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 AKR7LQ8NHP1 331 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 WFIKKN2Q8TEU8 576 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 KCNE5Q9UJ90 142 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 TNFSF18Q9UNG2 199 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 B9D1Q9UPM9 204 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 RNF215Q9Y6U7 377 aa13.17□□□□□ -0.3
PRDM4-201ENST00000228437 RPS11P62280 158 aaKnown RBP eCLIP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms