RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 GPR87Q9BY21 358 aa10.53□□□□□ -0.72
TNFAIP1-201ENST00000226225 COPZ2Q9P299 210 aa10.53□□□□□ -0.72
TNFAIP1-201ENST00000226225 WIF1Q9Y5W5 379 aa10.53□□□□□ -0.72
TNFAIP1-201ENST00000226225 A0A1W2PNR3 127 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 FADS1O60427 444 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 RP2O75695 350 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 NMBP08949 121 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 ZP3P21754 424 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 POLR2HP52434 150 aaKnown RBP10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 DCAF10Q5QP82 559 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 GRINAQ7Z429 371 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 FGD2Q7Z6J4 655 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 PIP4P1Q86T03 277 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 NKD1Q969G9 470 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 MMP25Q9NPA2 562 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 ASB6Q9NWX5 421 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 ALKBH4Q9NXW9 302 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 ICAM5Q9UMF0 924 aa10.52□□□□□ -0.72
TNFAIP1-201ENST00000226225 A0A087WV48 116 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 G3V3Q6 166 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 GOSR2O14653 212 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 LIPCP11150 499 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF35P13682 527 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 CEACAM1P13688 526 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 CFL1P23528 166 aaKnown RBP10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 CRMP1Q14194 572 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 OTPQ5XKR4 325 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 YRDCQ86U90 279 aaKnown RBP10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 DNAAF1Q8NEP3 725 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 M1APQ8TC57 530 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 HOXB13Q92826 284 aaPredicted RBP10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF775Q96BV0 537 aaPredicted RBP10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 KCTD12Q96CX2 325 aaKnown RBP10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 RASD2Q96D21 266 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 FER1L6-AS2Q96M78 137 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 HRASLSQ9HDD0 168 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 SIGLEC7Q9Y286 467 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF337Q9Y3M9 751 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 LOC100509620A0A075B734 347 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 TMEM200CA6NKL6 621 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 C21orf140B9A014 251 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 SERPINA7P05543 415 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 PSMB1P20618 241 aaKnown RBP10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 EFNB1P98172 346 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 FOXK2Q01167 660 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 LINC00303Q3SY05 128 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 HSD17B12Q53GQ0 312 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 RNLSQ5VYX0 342 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 TMEM225Q6GV28 225 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 MISPQ8IVT2 679 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 TNFAIP8L1Q8WVP5 186 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 TAAR8Q969N4 342 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 Q96M85 177 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 NMNAT3Q96T66 252 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 UTP23Q9BRU9 249 aaKnown RBP10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 IL20Q9NYY1 176 aa10.52□□□□□ -0.73
TNFAIP1-201ENST00000226225 UBL3O95164 117 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 ACHEP22303 614 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 ARG2P78540 354 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 C2orf68Q2NKX9 166 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 LRRN1Q6UXK5 716 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 MAMDC2Q7Z304 686 aaPredicted RBP10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZFP82Q8N141 532 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF441Q8N8Z8 693 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 OR52N1Q8NH53 320 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 LRRC46Q96FV0 321 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 ARL5BQ96KC2 179 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 NPAS1Q99742 590 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 MED17Q9NVC6 651 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 TAS2R3Q9NYW6 316 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 CHRNA9Q9UGM1 479 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 NCOR2Q9Y618 2525 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 NBASA2RRP1 2371 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 GDF1P27539 372 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 RBM34P42696 430 aaKnown RBP10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 CCR9P51686 369 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 SRYQ05066 204 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 ETFDHQ16134 617 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 C1orf140Q5VVS0 124 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 C2CD4CQ8TF44 421 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 SNX33Q8WV41 574 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 DCBLD2Q96PD2 775 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF649Q9BS31 505 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 MLXQ9UH92 298 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 LOC102723996A0A087X1L8 192 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 MFSD2BA6NFX1 497 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 KLK10O43240 276 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 HPP00738 406 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 CSN2P05814 226 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 EDNRAP25101 427 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 PITPNAQ00169 270 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 SORDQ00796 357 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 TLE3Q04726 772 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 HLXQ14774 488 aaPredicted RBP10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 LEG1Q6P5S2 330 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 MEPCEQ7L2J0 689 aaKnown RBP10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 ATG4DQ86TL0 474 aaPredicted RBP10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 FGF11Q92914 225 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 MARVELD3Q96A59 401 aa10.51□□□□□ -0.73
TNFAIP1-201ENST00000226225 ZNF524Q96C55 264 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms