RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 OR5L2Q8NGL0 311 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 OR6N1Q8NGY5 312 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 MFSD8Q8NHS3 518 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 IFI44Q8TCB0 444 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 PNPLA2Q96AD5 504 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 WDR89Q96FK6 387 aaPredicted RBP19.89■□□□□ 0.77
CCDC9-201ENST00000221922 SLC17A5Q9NRA2 495 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 MRPL22Q9NWU5 206 aaKnown RBP19.89■□□□□ 0.77
CCDC9-201ENST00000221922 ING1Q9UK53 422 aaPredicted RBP19.89■□□□□ 0.77
CCDC9-201ENST00000221922 ADAMTS9Q9P2N4 1935 aa19.89■□□□□ 0.77
CCDC9-201ENST00000221922 TRBV11-1A0A0K0K1C0 115 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 CYC1P08574 325 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 ITGA5P08648 1049 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 POU3F4P49335 361 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 ADAM8P78325 824 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 ODF4Q2M2E3 257 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 TEX30Q5JUR7 227 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 DNM1P34Q6PK57 102 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 NHLRC1Q6VVB1 395 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 C16orf47Q6ZP98 133 aaPredicted RBP19.88■□□□□ 0.77
CCDC9-201ENST00000221922 BPHLQ86WA6 291 aaPredicted RBP19.88■□□□□ 0.77
CCDC9-201ENST00000221922 MAML2Q8IZL2 1156 aaPredicted RBP19.88■□□□□ 0.77
CCDC9-201ENST00000221922 TSEN15Q8WW01 171 aaKnown RBP19.88■□□□□ 0.77
CCDC9-201ENST00000221922 WBP1Q96G27 269 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 SPSB2Q99619 263 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 GINS4Q9BRT9 223 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 UBE2QL1A1L167 161 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 HMSDA8MTL9 139 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 SLC17A2O00624 439 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 DAP3P51398 398 aaKnown RBP19.88■□□□□ 0.77
CCDC9-201ENST00000221922 FAM166AQ6J272 317 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 SLC35D2Q76EJ3 337 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 KRT77Q7Z794 578 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 SLC38A6Q8IZM9 456 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 THAP3Q8WTV1 239 aaPredicted RBP19.88■□□□□ 0.77
CCDC9-201ENST00000221922 ATOH1Q92858 354 aaPredicted RBP19.88■□□□□ 0.77
CCDC9-201ENST00000221922 OPN4Q9UHM6 478 aa19.88■□□□□ 0.77
CCDC9-201ENST00000221922 NPIPB13A6NJU9 1138 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 NPIPB4C9JG80 1138 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 ZNF208O43345 1280 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 ZNF354AO60765 605 aaPredicted RBP19.87■□□□□ 0.77
CCDC9-201ENST00000221922 RIDAP52758 137 aaKnown RBP19.87■□□□□ 0.77
CCDC9-201ENST00000221922 SSBP1Q04837 148 aaKnown RBP19.87■□□□□ 0.77
CCDC9-201ENST00000221922 MELKQ14680 651 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 TMEM205Q6UW68 189 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 CPEB2Q7Z5Q1 589 aaKnown RBP19.87■□□□□ 0.77
CCDC9-201ENST00000221922 OR4D10Q8NGI6 311 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 RNF138Q8WVD3 245 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 FAM3DQ96BQ1 224 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 C8orf44Q96CB5 159 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 DDIT4LQ96D03 193 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 ZC3H10Q96K80 434 aaKnown RBP19.87■□□□□ 0.77
CCDC9-201ENST00000221922 CACNA1CQ13936 2221 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 LOC100289279A0A1B0GTE1 492 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 TMEM200CA6NKL6 621 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 AKAIN1P0CW23 69 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 FGF5P12034 268 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 MAP2K6P52564 334 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 SEC61A1P61619 476 aaKnown RBP19.87■□□□□ 0.77
CCDC9-201ENST00000221922 TOMM20Q15388 145 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 RAB11BQ15907 218 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 C2orf76Q3KRA6 126 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 PHF19Q5T6S3 580 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 H1FNTQ75WM6 255 aaPredicted RBP19.87■□□□□ 0.77
CCDC9-201ENST00000221922 RBPMSQ93062 196 aaKnown RBP19.87■□□□□ 0.77
CCDC9-201ENST00000221922 CCDC120Q96HB5 630 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 APMAPQ9HDC9 416 aa19.87■□□□□ 0.77
CCDC9-201ENST00000221922 CDV3Q9UKY7 258 aaKnown RBP19.87■□□□□ 0.77
CCDC9-201ENST00000221922 NPIPA5E9PKD4 350 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 H3BSH0 61 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 RGS11O94810 467 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 MSX1P28360 303 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 CCKBRP32239 447 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 H2BFSP57053 126 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 EIF2B1Q14232 305 aaKnown RBP19.86■□□□□ 0.77
CCDC9-201ENST00000221922 ASPHD2Q6ICH7 369 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 TMEM65Q6PI78 240 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.86■□□□□ 0.77
CCDC9-201ENST00000221922 ASB10Q8WXI3 467 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 FOXN4Q96NZ1 517 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 CRB3Q9BUF7 120 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 OCIAD1Q9NX40 245 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 C19orf25Q9UFG5 118 aaPredicted RBP19.86■□□□□ 0.77
CCDC9-201ENST00000221922 NPIPA1Q9UND3 350 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 SPEF1Q9Y4P9 236 aa19.86■□□□□ 0.77
CCDC9-201ENST00000221922 TRAV18A0A075B6X5 111 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 PRSS3P35030 304 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 GUCA2AQ02747 115 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 IL11RAQ14626 422 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 GLRX5Q86SX6 157 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 GPAT4Q86UL3 456 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 OR5M1Q8NGP8 315 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 MED9Q9NWA0 146 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 ZNF224Q9NZL3 707 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 MED11Q9P086 117 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 FREM3P0C091 2139 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 MS4A18H0YCH9 400 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 SCO1O75880 301 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 KDM4BO94953 1096 aa19.85■□□□□ 0.77
CCDC9-201ENST00000221922 CER1O95813 267 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms