RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 COCHO43405 550 aa13.29□□□□□ -0.28
PTPRA-201ENST00000216877 SRPX2O60687 465 aaPredicted RBP13.29□□□□□ -0.28
PTPRA-201ENST00000216877 STC2O76061 302 aa13.29□□□□□ -0.28
PTPRA-201ENST00000216877 HLA-DQA2P01906 255 aa13.29□□□□□ -0.28
PTPRA-201ENST00000216877 NPSP0C0P6 89 aa13.29□□□□□ -0.28
PTPRA-201ENST00000216877 IL2RGP31785 369 aa13.29□□□□□ -0.28
PTPRA-201ENST00000216877 SPINT3P49223 89 aa13.29□□□□□ -0.28
PTPRA-201ENST00000216877 ELOCQ15369 112 aa13.29□□□□□ -0.28
PTPRA-201ENST00000216877 HMGN3Q15651 99 aa13.29□□□□□ -0.28
PTPRA-201ENST00000216877 C17orf78Q8N4C9 275 aa13.29□□□□□ -0.28
PTPRA-201ENST00000216877 METTL27Q8N6F8 245 aaPredicted RBP13.29□□□□□ -0.28
PTPRA-201ENST00000216877 GVQW1Q8N7I0 195 aa13.29□□□□□ -0.28
PTPRA-201ENST00000216877 C19orf47Q8N9M1 422 aaKnown RBP13.29□□□□□ -0.28
PTPRA-201ENST00000216877 CLEC1AQ8NC01 280 aa13.29□□□□□ -0.28
PTPRA-201ENST00000216877 TIMM10BQ9Y5J6 103 aa13.29□□□□□ -0.28
PTPRA-201ENST00000216877 LAMA2P24043 3122 aaKnown RBP13.29□□□□□ -0.28
PTPRA-201ENST00000216877 BHLHE40O14503 412 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 GPRIN2O60269 458 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 THY1P04216 161 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 ITGB2P05107 769 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 SELPP16109 830 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 FGF7P21781 194 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 NDUFS1P28331 727 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 TMEM115Q12893 351 aaPredicted RBP13.28□□□□□ -0.28
PTPRA-201ENST00000216877 TOMM34Q15785 309 aaPredicted RBP13.28□□□□□ -0.28
PTPRA-201ENST00000216877 MORN1Q5T089 497 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 OR51A4Q8NGJ6 313 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 COMMD4Q9H0A8 199 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 ADAP2Q9NPF8 381 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 LSM5Q9Y4Y9 91 aaKnown RBP13.28□□□□□ -0.28
PTPRA-201ENST00000216877 FNDC1Q4ZHG4 1894 aaPredicted RBP13.28□□□□□ -0.28
PTPRA-201ENST00000216877 TEX13DA0A0J9YY54 714 aaPredicted RBP13.28□□□□□ -0.28
PTPRA-201ENST00000216877 IGFALSP35858 605 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 UBE2V2Q15819 145 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 COL13A1Q5TAT6 717 aaPredicted RBP13.28□□□□□ -0.28
PTPRA-201ENST00000216877 C1orf189Q5VU69 101 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 P4HA3Q7Z4N8 544 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 SLC16A11Q8NCK7 471 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 TPSD1Q9BZJ3 242 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 TGIF2-C20orf24A0A0A6YYL0 155 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 TGOLN2O43493 480 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 TCF21O43680 179 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 ELFN1P0C7U0 828 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 FRKP42685 505 aaPredicted RBP13.28□□□□□ -0.28
PTPRA-201ENST00000216877 FUT5Q11128 374 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 OR9K2Q8NGE7 335 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 CDS1Q92903 461 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 AIF1LQ9BQI0 150 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 TEX101Q9BY14 249 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 ICKQ9UPZ9 632 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 ETV7Q9Y603 341 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 DOCK3Q8IZD9 2030 aa13.28□□□□□ -0.28
PTPRA-201ENST00000216877 AHSA1O95433 338 aa13.27□□□□□ -0.28
PTPRA-201ENST00000216877 MBPP02686 304 aaPredicted RBP13.27□□□□□ -0.28
PTPRA-201ENST00000216877 OR4N5Q8IXE1 308 aa13.27□□□□□ -0.28
PTPRA-201ENST00000216877 HSD17B11Q8NBQ5 300 aa13.27□□□□□ -0.28
PTPRA-201ENST00000216877 MARCH1Q8TCQ1 289 aa13.27□□□□□ -0.28
PTPRA-201ENST00000216877 GPBAR1Q8TDU6 330 aa13.27□□□□□ -0.28
PTPRA-201ENST00000216877 FAM83CQ9BQN1 747 aa13.27□□□□□ -0.28
PTPRA-201ENST00000216877 FBRSQ9HAH7 460 aa13.27□□□□□ -0.28
PTPRA-201ENST00000216877 CYP8B1Q9UNU6 501 aa13.27□□□□□ -0.28
PTPRA-201ENST00000216877 TRIP12Q14669 1992 aaPredicted RBP13.27□□□□□ -0.28
PTPRA-201ENST00000216877 THSD7BQ9C0I4 1608 aa13.27□□□□□ -0.28
PTPRA-201ENST00000216877 METTL12A8MUP2 240 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 SLC6A6P31641 620 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 ID2Q02363 134 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 RAB32Q13637 225 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 OR1Q1Q15612 314 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 LRRC18Q8N456 261 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 APCDD1LQ8NCL9 501 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 SAT2Q96F10 170 aaPredicted RBP13.27□□□□□ -0.29
PTPRA-201ENST00000216877 WDR92Q96MX6 357 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 LRFN5Q96NI6 719 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 ZNF587Q96SQ5 575 aaPredicted RBP13.27□□□□□ -0.29
PTPRA-201ENST00000216877 SLC2A4RGQ9NR83 387 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 A0A1W2PQ45 241 aaPredicted RBP13.27□□□□□ -0.29
PTPRA-201ENST00000216877 A0A1W2PQY0 241 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 ERI3O43414 337 aaKnown RBP13.27□□□□□ -0.29
PTPRA-201ENST00000216877 HIST1H2BKO60814 126 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 HIST1H2BJP06899 126 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 CD37P11049 281 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 RAB4AP20338 218 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 HIST1H2BOP23527 126 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 CHATP28329 748 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 HIST1H2BBP33778 126 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 CD200P41217 278 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 VEGFBP49765 207 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 HIST1H2BDP58876 126 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 RPS23P62266 143 aaKnown RBP13.27□□□□□ -0.29
PTPRA-201ENST00000216877 HIST1H2BCP62807 126 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 HIST2H2BEQ16778 126 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 CLEC12BQ2HXU8 276 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 SLC22A6Q4U2R8 563 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 LBHQ53QV2 105 aaPredicted RBP13.27□□□□□ -0.29
PTPRA-201ENST00000216877 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.27□□□□□ -0.29
PTPRA-201ENST00000216877 NCR3LG1Q68D85 454 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 OR6N2Q8NGY6 317 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 OR10J5Q8NHC4 309 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 HIST1H2BHQ93079 126 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 HIST1H2BNQ99877 126 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms