RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 PRAMEF8Q5VWM4 474 aa13.57□□□□□ -0.24
SRRD-201ENST00000215917 PRAMEF7Q5VXH5 474 aa13.57□□□□□ -0.24
SRRD-201ENST00000215917 RPL22L1Q6P5R6 122 aaKnown RBP13.57□□□□□ -0.24
SRRD-201ENST00000215917 LRRC61Q9BV99 259 aa13.57□□□□□ -0.24
SRRD-201ENST00000215917 CFAP54Q96N23 3096 aa13.57□□□□□ -0.24
SRRD-201ENST00000215917 IFITM5A6NNB3 132 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 GABARAPH6UMI1 98 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 ERCC1P07992 297 aaPredicted RBP13.56□□□□□ -0.24
SRRD-201ENST00000215917 GIPP09681 153 aaPredicted RBP13.56□□□□□ -0.24
SRRD-201ENST00000215917 CALCBP10092 127 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 MEP1BQ16820 701 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 COL13A1Q5TAT6 717 aaPredicted RBP13.56□□□□□ -0.24
SRRD-201ENST00000215917 NRSN2Q9GZP1 204 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 ZNF230Q9UIE0 474 aaPredicted RBP13.56□□□□□ -0.24
SRRD-201ENST00000215917 NPFFR2Q9Y5X5 522 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 C2orf72A6NCS6 295 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 CRTAPO75718 401 aaPredicted RBP13.56□□□□□ -0.24
SRRD-201ENST00000215917 ZP3P21754 424 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 CCNOP22674 350 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 P2RX1P51575 399 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 RIDAP52758 137 aaKnown RBP13.56□□□□□ -0.24
SRRD-201ENST00000215917 LIMK1P53667 647 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 VAMP2P63027 116 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 PRICKLE4Q2TBC4 344 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 DEFB133Q30KQ1 61 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 TRAPPC6BQ86SZ2 158 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 OR1J2Q8NGS2 313 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 ZNF775Q96BV0 537 aaPredicted RBP13.56□□□□□ -0.24
SRRD-201ENST00000215917 SARGQ9BW04 601 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 CHST6Q9GZX3 395 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 ELF5Q9UKW6 265 aaPredicted RBP13.56□□□□□ -0.24
SRRD-201ENST00000215917 WDFY4Q6ZS81 3184 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 A0A0U1RQK1 487 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 ZNF850A8MQ14 1090 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 CYR61O00622 381 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 CXCL2P19875 107 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 MANEAQ5SRI9 462 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 NKAIN2Q5VXU1 208 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 OR52W1Q6IF63 320 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 RFLNBQ8N5W9 214 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 HSD17B8Q92506 261 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 PTP4A1Q93096 173 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 UBE2ZQ9H832 354 aaPredicted RBP13.56□□□□□ -0.24
SRRD-201ENST00000215917 PRTFDC1Q9NRG1 225 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.56□□□□□ -0.24
SRRD-201ENST00000215917 SF3B6Q9Y3B4 125 aaKnown RBP13.56□□□□□ -0.24
SRRD-201ENST00000215917 CSAG2Q9Y5P2 127 aa13.56□□□□□ -0.24
SRRD-201ENST00000215917 A0A1W2PPC4 97 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 NPIPA5E9PKD4 350 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 TRIM77I1YAP6 450 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 SLC26A5P58743 744 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 RPS27AP62979 156 aaKnown RBP13.55□□□□□ -0.24
SRRD-201ENST00000215917 UBA52P62987 128 aaKnown RBP13.55□□□□□ -0.24
SRRD-201ENST00000215917 CLEC9AQ6UXN8 241 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 ZNF704Q6ZNC4 412 aaPredicted RBP13.55□□□□□ -0.24
SRRD-201ENST00000215917 ADGRG3Q86Y34 549 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 CDH26Q8IXH8 852 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 SUMF1Q8NBK3 374 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 FAM3DQ96BQ1 224 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 FLRT3Q9NZU0 649 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 NPIPA1Q9UND3 350 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 VDAC3Q9Y277 283 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 SUSD5O60279 629 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 CSTBP04080 98 aaKnown RBP13.55□□□□□ -0.24
SRRD-201ENST00000215917 MYF5P13349 255 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 NFYBP25208 207 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 ZNF283Q8N7M2 679 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 OR4C3Q8NH37 302 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 SMIM4Q8WVI0 70 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 TM4SF19Q96DZ7 209 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 PIGQQ9BRB3 760 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 DUSP22Q9NRW4 184 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 MMP24Q9Y5R2 645 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 KCTD18Q6PI47 426 aaPredicted RBP13.55□□□□□ -0.24
SRRD-201ENST00000215917 GLRX5Q86SX6 157 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 SLC35F3Q8IY50 421 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 RCBTB1Q8NDN9 531 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 NPAS1Q99742 590 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 PHF7Q9BWX1 381 aaPredicted RBP13.55□□□□□ -0.24
SRRD-201ENST00000215917 JAM3Q9BX67 310 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 BANF2Q9H503 90 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 FGF9P31371 208 aaPredicted RBP13.55□□□□□ -0.24
SRRD-201ENST00000215917 OR1D4P47884 311 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 ASCL1P50553 236 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 EFNB1P98172 346 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 CPEB2Q7Z5Q1 589 aaKnown RBP13.55□□□□□ -0.24
SRRD-201ENST00000215917 CMBLQ96DG6 245 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 PRO1933Q9H354 126 aa13.55□□□□□ -0.24
SRRD-201ENST00000215917 SLC22A23A1A5C7 686 aa13.54□□□□□ -0.24
SRRD-201ENST00000215917 OR5K3A6NET4 321 aa13.54□□□□□ -0.24
SRRD-201ENST00000215917 FABP1P07148 127 aa13.54□□□□□ -0.24
SRRD-201ENST00000215917 GFERP55789 205 aa13.54□□□□□ -0.24
SRRD-201ENST00000215917 S100A12P80511 92 aa13.54□□□□□ -0.24
SRRD-201ENST00000215917 RHEBQ15382 184 aa13.54□□□□□ -0.24
SRRD-201ENST00000215917 SGCAQ16586 387 aa13.54□□□□□ -0.24
SRRD-201ENST00000215917 PAPD4Q6PIY7 484 aaKnown RBP13.54□□□□□ -0.24
SRRD-201ENST00000215917 CORO6Q6QEF8 472 aa13.54□□□□□ -0.24
SRRD-201ENST00000215917 KIRREL2Q6UWL6 708 aa13.54□□□□□ -0.24
SRRD-201ENST00000215917 ANKRD9Q96BM1 317 aaPredicted RBP13.54□□□□□ -0.24
SRRD-201ENST00000215917 SLC41A2Q96JW4 573 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms