RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 RABL2AQ9UBK7 228 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-229ENST00000641891 GPN3Q9UHW5 284 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-229ENST00000641891 ITGB1BP2Q9UKP3 347 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 RABL2BQ9UNT1 228 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 R4GMQ9 66 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 MASP2O00187 686 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 NTN3O00634 580 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-229ENST00000641891 YKT6O15498 198 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 GLSO94925 669 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-229ENST00000641891 STOMP27105 288 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 ERP29P30040 261 aaKnown RBP15.15■□□□□ 0.02
PHGDH-229ENST00000641891 DCTDP32321 178 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 SFTPDP35247 375 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 POU3F4P49335 361 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 ST3GAL2Q16842 350 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 TRIM61Q5EBN2 209 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 TMEM225Q6GV28 225 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 LRFN4Q6PJG9 635 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 LIX1LQ8IVB5 337 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 ZFAND1Q8TCF1 268 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 OR5B2Q96R09 309 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 G6PC2Q9NQR9 355 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 CENPMQ9NSP4 180 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 B3GALT5Q9Y2C3 310 aa15.15■□□□□ 0.02
PHGDH-229ENST00000641891 PTRH2Q9Y3E5 179 aaKnown RBP15.15■□□□□ 0.02
PHGDH-229ENST00000641891 CHCHD2Q9Y6H1 151 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-229ENST00000641891 A0A1W2PNV4 684 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 NPIPB13A6NJU9 1138 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 NPIPB4C9JG80 1138 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 AKR7A2O43488 359 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 SULT1B1O43704 296 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 CXCL3P19876 107 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 P2RY4P51582 365 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 MAP2K6P52564 334 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 PCK2Q16822 640 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 PEAR1Q5VY43 1037 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-229ENST00000641891 C3orf33Q6P1S2 294 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 NHLRC1Q6VVB1 395 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 DEFB123Q8N688 67 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 OR11G2Q8NGC1 345 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 C11orf40Q8WZ69 217 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 DACT3Q96B18 629 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-229ENST00000641891 NIPAL2Q9H841 368 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 WDR54Q9H977 334 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 EML6Q6ZMW3 1958 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 LOC102723996A0A087X1L8 192 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 IGHV1-45A0A0A0MS14 117 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 ANKRD20A5PA0PJZ0 165 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 RAMP1O60894 148 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 KDM4BO94953 1096 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 SNRPD2P62316 118 aaKnown RBP15.14■□□□□ 0.01
PHGDH-229ENST00000641891 CAMK2DQ13557 499 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 RAB11BQ15907 218 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 LPAL2Q16609 132 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 GPAT4Q86UL3 456 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 AGBL5Q8NDL9 886 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 OR4K17Q8NGC6 315 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 OR51A2Q8NGJ7 313 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 AKAP7Q9P0M2 348 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-229ENST00000641891 ZNF222Q9UK12 451 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 OR52A1Q9UKL2 312 aa15.14■□□□□ 0.01
PHGDH-229ENST00000641891 LOC107986453A0A1B0GWG9 222 aa15.13■□□□□ 0.01
PHGDH-229ENST00000641891 FABP7O15540 132 aa15.13■□□□□ 0.01
PHGDH-229ENST00000641891 CTAG2O75638 210 aa15.13■□□□□ 0.01
PHGDH-229ENST00000641891 ECDO95905 644 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-229ENST00000641891 ZXDAP98168 799 aa15.13■□□□□ 0.01
PHGDH-229ENST00000641891 C2orf76Q3KRA6 126 aa15.13■□□□□ 0.01
PHGDH-229ENST00000641891 CARD17Q5XLA6 110 aa15.13■□□□□ 0.01
PHGDH-229ENST00000641891 OR13C3Q8NGS6 347 aa15.13■□□□□ 0.01
PHGDH-229ENST00000641891 OR2M2Q96R28 347 aa15.13■□□□□ 0.01
PHGDH-229ENST00000641891 OR10A4Q9H209 315 aa15.13■□□□□ 0.01
PHGDH-229ENST00000641891 KLHL13Q9P2N7 655 aa15.13■□□□□ 0.01
PHGDH-229ENST00000641891 CGGBP1Q9UFW8 167 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-229ENST00000641891 RPH3AQ9Y2J0 694 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-229ENST00000641891 ACOT7O00154 380 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 SLC17A2O00624 439 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 XRCC3O43542 346 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 KLF7O75840 302 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-229ENST00000641891 AQP8O94778 261 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 HPXP02790 462 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 COX6A1P12074 109 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 MNDAP41218 407 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 ZFP36L1Q07352 338 aaKnown RBP15.12■□□□□ 0.01
PHGDH-229ENST00000641891 SNTA1Q13424 505 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 TNK1Q13470 666 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 KIF26BQ2KJY2 2108 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 LAMTOR1Q6IAA8 161 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 UEVLDQ8IX04 471 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 FADS6Q8N9I5 356 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 OR1J4Q8NGS1 313 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 OR56B4Q8NH76 319 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 FAM3DQ96BQ1 224 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 SLC25A44Q96H78 314 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-229ENST00000641891 MRPL13Q9BYD1 178 aaKnown RBP15.12■□□□□ 0.01
PHGDH-229ENST00000641891 FANCFQ9NPI8 374 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 WDFY4Q6ZS81 3184 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 TMEM269A0A1B0GVZ9 245 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 A0A1W2PPL8 197 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 A0A1W2PQ72 361 aa15.12■□□□□ 0.01
PHGDH-229ENST00000641891 P2RY10O00398 339 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms