RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 SLC24A3Q9HC58 644 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 EMC7Q9NPA0 242 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 SNX5Q9Y5X3 404 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 COMMD3-BMI1R4GMX3 469 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 DOPEY1Q5JWR5 2465 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 ABCA12Q86UK0 2595 aa11.38□□□□□ -0.59
PHGDH-218ENST00000641491 ANKRD17O75179 2603 aaKnown RBP11.38□□□□□ -0.59
PHGDH-218ENST00000641491 SHANK1Q9Y566 2161 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 DAPL1A0PJW8 107 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF593O00488 134 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-218ENST00000641491 LYNP07948 512 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 EDNRAP25101 427 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 HSD11B1P28845 292 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 APLNRP35414 380 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 UGT2B10P36537 528 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 SLC15A1P46059 708 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF133P52736 654 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-218ENST00000641491 SORDQ00796 357 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 PPA1Q15181 289 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 HIKESHIQ53FT3 197 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 TIMM23BQ5SRD1 257 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 C6orf141Q5SZD1 244 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF544Q6NX49 715 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 TMEM154Q6P9G4 183 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 LIX1LQ8IVB5 337 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF511Q8NB15 262 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 SLC26A10Q8NG04 563 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 OR52N5Q8NH56 324 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 SSC4DQ8WTU2 575 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 THEM6Q8WUY1 208 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 SNX33Q8WV41 574 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 ITLN2Q8WWU7 325 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-218ENST00000641491 ASB17Q8WXJ9 295 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 UBE2FQ969M7 185 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 S100PBPQ96BU1 408 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 SH3GL3Q99963 347 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 COPS4Q9BT78 406 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 HCAR1Q9BXC0 346 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 YIPF3Q9GZM5 350 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 OR10A4Q9H209 315 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 C1orf198Q9H425 327 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 WDR76Q9H967 626 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 VCX3AQ9NNX9 186 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 AMBNQ9NP70 447 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 PLEK2Q9NYT0 353 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 ASH2LQ9UBL3 628 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 IKZF2Q9UKS7 526 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 MYRFQ9Y2G1 1151 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 TIMM10BQ9Y5J6 103 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 KIAA1549Q9HCM3 1950 aa11.37□□□□□ -0.59
PHGDH-218ENST00000641491 RP1L1Q8IWN7 2480 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-218ENST00000641491 ZGRF1Q86YA3 2104 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 PRRC2CQ9Y520 2896 aaKnown RBP11.36□□□□□ -0.59
PHGDH-218ENST00000641491 IGKV1D-43A0A0B4J1Z2 117 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 TUBAL3A6NHL2 446 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 OR5H1A6NKK0 313 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 PTGES3LE9PB15 166 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 SLC1A7O00341 560 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 DCTN6O00399 190 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 MYL12BO14950 172 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 DOK2O60496 412 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 SELENOFO60613 162 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 TNFAIP8O95379 198 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 GPANK1O95872 356 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 CCDC159P0C7I6 412 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 GAAP10253 952 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 SLC2A5P22732 501 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 CXCR4P61073 352 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 ACTA2P62736 377 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 ACTG2P63267 376 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 FAM27E3Q08E93 113 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 GGTLC2Q14390 218 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 TSC22D1Q15714 1073 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 GABRA6Q16445 453 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 MEP1BQ16820 701 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF362Q5T0B9 420 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-218ENST00000641491 FAM27BQ5VT28 67 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 HIST2H2BCQ6DN03 193 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 ARL9Q6T311 187 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 UNQ6126/PRO20091Q6UXV3 157 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 STAC2Q6ZMT1 411 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 AHSA2Q719I0 299 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 LINGO2Q7L985 606 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 SYT9Q86SS6 491 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 LINC00346Q8IVM7 164 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 WDFY1Q8IWB7 410 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 OR1J2Q8NGS2 313 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 NMD3Q96D46 503 aaKnown RBP11.36□□□□□ -0.59
PHGDH-218ENST00000641491 ZC3HAV1LQ96H79 300 aaKnown RBP11.36□□□□□ -0.59
PHGDH-218ENST00000641491 TMEM80Q96HE8 168 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 TBX5Q99593 518 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 ZNF416Q9BWM5 594 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 YTHDF1Q9BYJ9 559 aaKnown RBP11.36□□□□□ -0.59
PHGDH-218ENST00000641491 SLC17A5Q9NRA2 495 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 INPP5EQ9NRR6 644 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 HAO2Q9NYQ3 351 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 CNOT2Q9NZN8 540 aaKnown RBP11.36□□□□□ -0.59
PHGDH-218ENST00000641491 JKAMPQ9P055 326 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 AASSQ9UDR5 926 aa11.36□□□□□ -0.59
PHGDH-218ENST00000641491 PLEKHB1Q9UF11 243 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms