RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 TMEM239Q8WW34 195 aa10.23□□□□□ -0.77
CACNA1A-250ENST00000637809 DIRC2Q96SL1 478 aa10.23□□□□□ -0.77
CACNA1A-250ENST00000637809 TXNIPQ9H3M7 391 aa10.23□□□□□ -0.77
CACNA1A-250ENST00000637809 PLEK2Q9NYT0 353 aa10.23□□□□□ -0.77
CACNA1A-250ENST00000637809 STX18Q9P2W9 335 aaKnown RBP10.23□□□□□ -0.77
CACNA1A-250ENST00000637809 CGGBP1Q9UFW8 167 aaPredicted RBP10.23□□□□□ -0.77
CACNA1A-250ENST00000637809 RIMS3Q9UJD0 308 aa10.23□□□□□ -0.77
CACNA1A-250ENST00000637809 NDUFAF1Q9Y375 327 aa10.23□□□□□ -0.77
CACNA1A-250ENST00000637809 F5H0A9 414 aaPredicted RBP10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 OR5F1O95221 314 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 CST2P09228 141 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 SBK2P0C263 348 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 LAP3P28838 519 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 SLC6A9P48067 706 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 TNFAIP6P98066 277 aaPredicted RBP10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 CD47Q08722 323 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 PSG7Q13046 419 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 PIN1Q13526 163 aaPredicted RBP10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 MTX3Q5HYI7 312 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 INTS11Q5TA45 600 aaKnown RBP10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 ZNF774Q6NX45 483 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 UNQ6126/PRO20091Q6UXV3 157 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 RBMS3Q6XE24 437 aaKnown RBP10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 LRRC28Q86X40 367 aaPredicted RBP10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 ZNF283Q8N7M2 679 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 LRRC8CQ8TDW0 803 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 STON2Q8WXE9 905 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 C4orf45Q96LM5 186 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 SIGLEC11Q96RL6 698 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 DCLRE1CQ96SD1 692 aaKnown RBP10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 ALG12Q9BV10 488 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 POFUT1Q9H488 388 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 RABEP2Q9H5N1 569 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 PATZ1Q9HBE1 687 aaKnown RBP10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 TMEM106BQ9NUM4 274 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 EGFL7Q9UHF1 273 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 HIF3AQ9Y2N7 669 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 SH3GLB1Q9Y371 365 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 TIMM10BQ9Y5J6 103 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 INSIG2Q9Y5U4 225 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 AUP1Q9Y679 476 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 WNK2Q9Y3S1 2297 aa10.22□□□□□ -0.77
CACNA1A-250ENST00000637809 GMNCA6NCL1 334 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 A8MXK9 166 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 ANGPT2O15123 496 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 SHOX2O60902 331 aaPredicted RBP10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 SCG5P05408 212 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 RNASE1P07998 156 aaKnown RBP10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 TAS2R41P59536 307 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 NFYCQ13952 458 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 ENDOGQ14249 297 aaKnown RBP10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 ZMYND11Q15326 602 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 TMEM155Q4W5P6 130 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 ZMAT1Q5H9K5 638 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 ARMCX4Q5H9R4 360 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 BEND6Q5SZJ8 279 aaPredicted RBP10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 Q6ZR03 302 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 CALHM3Q86XJ0 350 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 SPICQ8N5J4 248 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 LRRC75AQ8NAA5 344 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 SLC26A7Q8TE54 656 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 RASSF5Q8WWW0 418 aa10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 TAF15Q92804 592 aaKnown RBP eCLIP10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 POLR2J2Q9GZM3 115 aaKnown RBP10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 POLR2J3Q9H1A7 115 aaKnown RBP10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 UNKLQ9H9P5 680 aaKnown RBP10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 ZMAT3Q9HA38 289 aaKnown RBP10.21□□□□□ -0.77
CACNA1A-250ENST00000637809 ARHGAP32A7KAX9 2087 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 CLDN34H7C241 214 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 TIMM8AO60220 97 aaPredicted RBP10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 PIP5K1CO60331 668 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 VIMP08670 466 aaKnown RBP10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 NR2C1P13056 603 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 FUT4P22083 530 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 ARHGDIAP52565 204 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 RPL27P61353 136 aaKnown RBP10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 BTG1P62324 171 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 PAX2Q02962 417 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 PAX8Q06710 450 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 BAMBIQ13145 260 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 TOP3AQ13472 1001 aaPredicted RBP10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 FHL1Q13642 323 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 TAF11Q15544 211 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 PDLIM3Q53GG5 364 aaPredicted RBP10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 ALG10Q5BKT4 473 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 TREML4Q6UXN2 200 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 ALDH16A1Q8IZ83 802 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 KLHL36Q8N4N3 616 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 TSPEARQ8WU66 669 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 SAMD8Q96LT4 415 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 GPA33Q99795 319 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 ELOVL3Q9HB03 270 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 MED31Q9Y3C7 131 aa10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 SOX21Q9Y651 276 aaPredicted RBP10.2□□□□□ -0.78
CACNA1A-250ENST00000637809 FXYD1O00168 92 aa10.19□□□□□ -0.78
CACNA1A-250ENST00000637809 FBP2O00757 339 aa10.19□□□□□ -0.78
CACNA1A-250ENST00000637809 ABHD16AO95870 558 aa10.19□□□□□ -0.78
CACNA1A-250ENST00000637809 THRBP10828 461 aa10.19□□□□□ -0.78
CACNA1A-250ENST00000637809 KITLGP21583 273 aa10.19□□□□□ -0.78
CACNA1A-250ENST00000637809 CD80P33681 288 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms