RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 RHOUQ7L0Q8 258 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 ZNF679Q8IYX0 411 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 THEM6Q8WUY1 208 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 RPL3LQ92901 407 aaKnown RBP13.57□□□□□ -0.24
CLN6-219ENST00000637329 SMIM19Q96E16 107 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 GPR137Q96N19 417 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 FOXN4Q96NZ1 517 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 TTTY10Q9BZA0 68 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 OR51E2Q9H255 320 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 SLCO5A1Q9H2Y9 848 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 CYB5R1Q9UHQ9 305 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 MRM2Q9UI43 246 aaKnown RBP13.57□□□□□ -0.24
CLN6-219ENST00000637329 ST6GALNAC2Q9UJ37 374 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 IKZF2Q9UKS7 526 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 SSR3Q9UNL2 185 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 SF3B6Q9Y3B4 125 aaKnown RBP13.57□□□□□ -0.24
CLN6-219ENST00000637329 PIEZO2Q9H5I5 2752 aa13.57□□□□□ -0.24
CLN6-219ENST00000637329 MED12Q93074 2177 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 PRR32B1ATL7 298 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 OGG1O15527 345 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 GPRIN2O60269 458 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 SS18L1O75177 396 aaPredicted RBP13.56□□□□□ -0.24
CLN6-219ENST00000637329 OR8G3PP0DMU2 310 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 NPR2P20594 1047 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 FGF9P31371 208 aaPredicted RBP13.56□□□□□ -0.24
CLN6-219ENST00000637329 UGT2B10P36537 528 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 CRYBB2P43320 205 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 TUBA1BP68363 451 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 PLEKHN1Q494U1 663 aaPredicted RBP13.56□□□□□ -0.24
CLN6-219ENST00000637329 KRTCAP3Q53RY4 240 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 ZNF544Q6NX49 715 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 TUBA1AQ71U36 451 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 ST7LQ8TDW4 575 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 GMPPAQ96IJ6 420 aaPredicted RBP13.56□□□□□ -0.24
CLN6-219ENST00000637329 CHCHD6Q9BRQ6 235 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 ABHD6Q9BV23 337 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 CDADC1Q9BWV3 514 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 MROQ9BYG7 248 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 KCNN2Q9H2S1 579 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 SEC61A2Q9H9S3 476 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 POLR1DQ9Y2S0 133 aa13.56□□□□□ -0.24
CLN6-219ENST00000637329 ARPC4-TTLL3A0A0A6YYG9 625 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 LOC100506127A0A0U1RQW1 187 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 TRDV1A0A1B0GX56 115 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 A0A1W2PPW3 197 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 AHRRA9YTQ3 701 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 RPL36A-HNRNPH2H7BZ11 118 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 UPK3AO75631 287 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 RGS9O75916 674 aaPredicted RBP13.55□□□□□ -0.24
CLN6-219ENST00000637329 MPZL1O95297 269 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 SERPINA3P01011 423 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 DCTDP32321 178 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 PTGER4P35408 488 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 RIDAP52758 137 aaKnown RBP13.55□□□□□ -0.24
CLN6-219ENST00000637329 VBP1P61758 197 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 NCS1P62166 190 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 RPS25P62851 125 aaKnown RBP13.55□□□□□ -0.24
CLN6-219ENST00000637329 SPCS2Q15005 226 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 PHYHD1Q5SRE7 291 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 FDX2Q6P4F2 183 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 DCXRQ7Z4W1 244 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 KRT77Q7Z794 578 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.55□□□□□ -0.24
CLN6-219ENST00000637329 TUSC5Q8IXB3 177 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 MS4A15Q8N5U1 240 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 YIPF7Q8N8F6 280 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 ZFP41Q8N8Y5 198 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 OR2AJ1Q8NGZ0 328 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 RNF133Q8WVZ7 376 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 NABP1Q96AH0 204 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 APH1AQ96BI3 265 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 PGLYRP3Q96LB9 341 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 WACQ9BTA9 647 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 C1orf198Q9H425 327 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 SIAEQ9HAT2 523 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 LHFPL6Q9Y693 200 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 UNC79Q9P2D8 2635 aa13.55□□□□□ -0.24
CLN6-219ENST00000637329 A0A1B0GTH9 108 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 PNMA8CA0A1B0GUJ8 204 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 ZNF878C9JN71 531 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 E9PI62 339 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 GPX5O75715 221 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 GABRA1P14867 456 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 NR4A1P22736 598 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 EDNRAP25101 427 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 PCSK6P29122 969 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 AGTR1P30556 359 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 NTF4P34130 210 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 RPS27P42677 84 aaKnown RBP13.54□□□□□ -0.24
CLN6-219ENST00000637329 GDI2P50395 445 aaKnown RBP13.54□□□□□ -0.24
CLN6-219ENST00000637329 ACSF3Q4G176 576 aaPredicted RBP13.54□□□□□ -0.24
CLN6-219ENST00000637329 LIPNQ5VXI9 398 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 ZNF324BQ6AW86 544 aaPredicted RBP13.54□□□□□ -0.24
CLN6-219ENST00000637329 OR2A2Q6IF42 318 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 ARL9Q6T311 187 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 P4HA3Q7Z4N8 544 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 ABHD12BQ7Z5M8 362 aaPredicted RBP13.54□□□□□ -0.24
CLN6-219ENST00000637329 NDNFQ8TB73 568 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 WNT2BQ93097 391 aa13.54□□□□□ -0.24
CLN6-219ENST00000637329 ALKBH3Q96Q83 286 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms