RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CLPTM1O96005 669 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 MT-ND5P03915 603 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 IGFBP1P08833 259 aaPredicted RBP11.84□□□□□ -0.51
PNKP-228ENST00000637325 IGHV4-31P0DP07 118 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 ZNF250P15622 560 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 GCH1P30793 250 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 ERVS71-1P61550 626 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 ZNF718Q3SXZ3 478 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 ZNF774Q6NX45 483 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 TMEM154Q6P9G4 183 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 THSD4Q6ZMP0 1018 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 SYT9Q86SS6 491 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 ADCK1Q86TW2 530 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 ARHGAP24Q8N264 748 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 FANK1Q8TC84 345 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 POM121L2Q96KW2 1035 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 GPX7Q96SL4 187 aaPredicted RBP11.84□□□□□ -0.51
PNKP-228ENST00000637325 FUZQ9BT04 418 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 WACQ9BTA9 647 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 WNT5BQ9H1J7 359 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 SYT4Q9H2B2 425 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 EMC7Q9NPA0 242 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 IL1RAPQ9NPH3 570 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 NRIP3Q9NQ35 241 aa11.84□□□□□ -0.51
PNKP-228ENST00000637325 LOC100509620A0A075B734 347 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 LYNX1G3V0Z9 82 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 PPP1R3DO95685 299 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 LYNX1P0DP58 116 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 CTLA4P16410 223 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 ZNF16P17020 682 aaPredicted RBP11.83□□□□□ -0.52
PNKP-228ENST00000637325 ZNF23P17027 643 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 CALB2P22676 271 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 GIFP27352 417 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 SLC6A6P31641 620 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 CENPAP49450 140 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 ARHGDIAP52565 204 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 SCRN3Q0VDG4 424 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 ENDOGQ14249 297 aaKnown RBP11.83□□□□□ -0.52
PNKP-228ENST00000637325 MTX3Q5HYI7 312 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 ARL9Q6T311 187 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 UGT2A3Q6UWM9 527 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 ZER1Q7Z7L7 766 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 JAZF1Q86VZ6 243 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 GNPDA2Q8TDQ7 276 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 ERMAPQ96PL5 475 aaPredicted RBP11.83□□□□□ -0.52
PNKP-228ENST00000637325 GPA33Q99795 319 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 ELOVL3Q9HB03 270 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 HINT3Q9NQE9 182 aaKnown RBP11.83□□□□□ -0.52
PNKP-228ENST00000637325 ACTR3BQ9P1U1 418 aa11.83□□□□□ -0.52
PNKP-228ENST00000637325 NDRG4Q9ULP0 352 aaKnown RBP11.83□□□□□ -0.52
PNKP-228ENST00000637325 IGLV3-9A0A075B6K5 115 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 LOC100289279A0A1B0GTE1 492 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 C17orf100A8MU93 164 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 TNFRSF11BO00300 401 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 TPD52L2O43399 206 aaKnown RBP11.82□□□□□ -0.52
PNKP-228ENST00000637325 DOK2O60496 412 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 KRT36O76013 467 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 RENP00797 406 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 HPXP02790 462 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 SCG5P05408 212 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 ATP6V1B2P21281 511 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 FPR3P25089 353 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 CHN2P52757 468 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 FXYD6P3P58550 94 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 GLO1Q04760 184 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 RFX4Q33E94 735 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 CHRFAM7AQ494W8 412 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 SPATA46Q5T0L3 261 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 DNM1P34Q6PK57 102 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 RINLQ6ZS11 566 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 DHFR2Q86XF0 187 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 PRIMA1Q86XR5 153 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 HIPK1Q86Z02 1210 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 GLB1L2Q8IW92 636 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 C1orf174Q8IYL3 243 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 ABHD4Q8TB40 342 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 RDH5Q92781 318 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 C4orf45Q96LM5 186 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 IFT27Q9BW83 186 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 OR52D1Q9H346 318 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 MUC13Q9H3R2 512 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 CHODLQ9H9P2 273 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 VSX1Q9NZR4 365 aaPredicted RBP11.82□□□□□ -0.52
PNKP-228ENST00000637325 KCNS2Q9ULS6 477 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 COA3Q9Y2R0 106 aaPredicted RBP11.82□□□□□ -0.52
PNKP-228ENST00000637325 POLR1DQ9Y2S0 133 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 DYSFO75923 2080 aa11.82□□□□□ -0.52
PNKP-228ENST00000637325 LRP5LA4QPB2 252 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 IMPA2O14732 288 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 SGCEO43556 437 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 LMX1BO60663 402 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 ABHD16AO95870 558 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 TXNDC12O95881 172 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 ACHEP22303 614 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 COL8A2P25067 703 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 NOS3P29474 1203 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 CRABP1P29762 137 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 WNT5AP41221 380 aa11.81□□□□□ -0.52
PNKP-228ENST00000637325 CDKN2AP42771 156 aaKnown RBP11.81□□□□□ -0.52
PNKP-228ENST00000637325 GPR6P46095 362 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms