RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 NTF4P34130 210 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 CAPZA2P47755 286 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 CDH11P55287 796 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 ISL1P61371 349 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 ACTC1P68032 377 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 ACTA1P68133 377 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 RUNX1T1Q06455 604 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 TFF3Q07654 80 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 SCRN3Q0VDG4 424 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 MED21Q13503 144 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 MAD2L1BPQ15013 274 aaPredicted RBP5.89□□□□□ -1.47
UPF3B-205ENST00000636792 GABRA6Q16445 453 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 PCK2Q16822 640 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 ZIK1Q3SY52 487 aaPredicted RBP5.89□□□□□ -1.47
UPF3B-205ENST00000636792 SLC36A2Q495M3 483 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 SLC35F1Q5T1Q4 408 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 KRT80Q6KB66 452 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 LRFN4Q6PJG9 635 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF474Q6S9Z5 364 aaPredicted RBP5.89□□□□□ -1.47
UPF3B-205ENST00000636792 STAC2Q6ZMT1 411 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 BHLHA15Q7RTS1 189 aaPredicted RBP5.89□□□□□ -1.47
UPF3B-205ENST00000636792 THAP5Q7Z6K1 395 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 C1orf174Q8IYL3 243 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 ENTHD1Q8IYW4 607 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 OR6V1Q8N148 313 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 IQCF1Q8N6M8 205 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 TCEANCQ8N8B7 351 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 SYT14Q8NB59 555 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 ACBD4Q8NC06 268 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 PROKR2Q8NFJ6 384 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 OR10H5Q8NGA6 315 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 HSD17B8Q92506 261 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 ITFG2Q969R8 447 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 NABP1Q96AH0 204 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 MRPL48Q96GC5 212 aaKnown RBP5.89□□□□□ -1.47
UPF3B-205ENST00000636792 IL4I1Q96RQ9 567 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 JAM3Q9BX67 310 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 YTHDF1Q9BYJ9 559 aaKnown RBP5.89□□□□□ -1.47
UPF3B-205ENST00000636792 YIPF3Q9GZM5 350 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 HDHD2Q9H0R4 259 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 OPN3Q9H1Y3 402 aaPredicted RBP5.89□□□□□ -1.47
UPF3B-205ENST00000636792 POLE4Q9NR33 117 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 SLC17A5Q9NRA2 495 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 INPP5EQ9NRR6 644 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 PLCXD1Q9NUJ7 323 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 MRPS18AQ9NVS2 196 aaKnown RBP5.89□□□□□ -1.47
UPF3B-205ENST00000636792 CNOT2Q9NZN8 540 aaKnown RBP5.89□□□□□ -1.47
UPF3B-205ENST00000636792 NDRG3Q9UGV2 375 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 PRSS50Q9UI38 385 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 B9D1Q9UPM9 204 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 RPL36Q9Y3U8 105 aaKnown RBP5.89□□□□□ -1.47
UPF3B-205ENST00000636792 UGT2A1Q9Y4X1 527 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 COMMD3-BMI1R4GMX3 469 aa5.89□□□□□ -1.47
UPF3B-205ENST00000636792 CHD6Q8TD26 2715 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 EFCAB10A6NFE3 127 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 TLX2O43763 284 aaPredicted RBP5.88□□□□□ -1.47
UPF3B-205ENST00000636792 KALRNO60229 2985 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 MRPS14O60783 128 aaKnown RBP5.88□□□□□ -1.47
UPF3B-205ENST00000636792 SLC2A10O95528 541 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 APOC1P02654 83 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 IGFBP1P08833 259 aaPredicted RBP5.88□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF823P16415 610 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 IGFBP2P18065 325 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 UGT2B10P36537 528 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 ARR3P36575 388 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 POLR2IP36954 125 aaKnown RBP5.88□□□□□ -1.47
UPF3B-205ENST00000636792 MTNR1AP48039 350 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 ENTPD1P49961 510 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 NUDT6P53370 316 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 NR1H2P55055 460 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 UBE2NP61088 152 aaKnown RBP5.88□□□□□ -1.47
UPF3B-205ENST00000636792 IL5RAQ01344 420 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 FMODQ06828 376 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 RAB40BQ12829 278 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 GSG1Q2KHT4 349 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 TBRG1Q3YBR2 411 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 KLHL22Q53GT1 634 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 LINC01590Q5TEZ4 76 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 TMEM236Q5W0B7 351 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 CARD17Q5XLA6 110 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 TMEM53Q6P2H8 277 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 PLBD1Q6P4A8 553 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 DEGS2Q6QHC5 323 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 PLXDC2Q6UX71 529 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 SEZ6L2Q6UXD5 910 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 UNQ6126/PRO20091Q6UXV3 157 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF813Q6ZN06 617 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 MEPCEQ7L2J0 689 aaKnown RBP5.88□□□□□ -1.47
UPF3B-205ENST00000636792 LINGO2Q7L985 606 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 SLC16A14Q7RTX9 510 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 SLC16A9Q7RTY1 509 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 LUZP2Q86TE4 346 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 CCDC71Q8IV32 467 aaPredicted RBP5.88□□□□□ -1.47
UPF3B-205ENST00000636792 LIX1LQ8IVB5 337 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 CPOQ8IVL8 374 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 SLC22A24Q8N4F4 322 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 CYB561A3Q8NBI2 242 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 IL17RDQ8NFM7 739 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 ASB17Q8WXJ9 295 aa5.88□□□□□ -1.47
UPF3B-205ENST00000636792 BCL2L2Q92843 193 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms