RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SPICQ8N5J4 248 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 ASB12Q8WXK4 309 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 LRFN5Q96NI6 719 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 PLCL2Q9UPR0 1127 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 PRELID1Q9Y255 219 aa12.62□□□□□ -0.39
CACNA1A-228ENST00000636610 COL6A3P12111 3177 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 TRBV5-7A0A0A0MS05 114 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 GP1BBP13224 206 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 KCTD9Q7L273 389 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 TMPRSS9Q7Z410 1059 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 DCXRQ7Z4W1 244 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 PRSS42Q7Z5A4 293 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 NUDCD2Q8WVJ2 157 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 ASB5Q8WWX0 329 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 MCHR2Q969V1 340 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 SLC25A28Q96A46 364 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 OR8B4Q96RC9 309 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 SLC19A3Q9BZV2 496 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 S1PR5Q9H228 398 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 APMAPQ9HDC9 416 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 LANCL2Q9NS86 450 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 NOP16Q9Y3C1 178 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 TMED7-TICAM2A0A0A6YYA0 188 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 CDK2AP1O14519 115 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 VAMP1P23763 118 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 HTR2CP28335 458 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 RASGEF1BQ0VAM2 473 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 CDNFQ49AH0 187 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 SLC18B1Q6NT16 456 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 C3orf33Q6P1S2 294 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 ATRAIDQ6UW56 229 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 ZNF679Q8IYX0 411 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 ZNF454Q8N9F8 522 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 MRPL38Q96DV4 380 aaKnown RBP12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 SEH1LQ96EE3 360 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 ZNF75AQ96N20 296 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 DPYSL5Q9BPU6 564 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 C12orf4Q9NQ89 552 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 MMP17Q9ULZ9 603 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 TMED7Q9Y3B3 224 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 ETV7Q9Y603 341 aa12.61□□□□□ -0.39
CACNA1A-228ENST00000636610 LOC100289279A0A1B0GTE1 492 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 TMEM82A0PJX8 343 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 OR2A4O95047 310 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 BGLAPP02818 100 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 CSF1P09603 554 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 CPN1P15169 458 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 OR7A5Q15622 319 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 ZNF546Q86UE3 836 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 COMMD2Q86X83 199 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 ZNF440Q8IYI8 595 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 RPS4Y2Q8TD47 263 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 PNPLA2Q96AD5 504 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 OR2A7Q96R45 310 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 REG4Q9BYZ8 158 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 PRR13Q9NZ81 148 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 CTSFQ9UBX1 484 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 MSRAQ9UJ68 235 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 TMEM14AQ9Y6G1 99 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 FAM221BA6H8Z2 402 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 DDAH2O95865 285 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 PLATP00750 562 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 OR4E1P0C645 316 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 GABRA1P14867 456 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 ABCD3P28288 659 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 RIDAP52758 137 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 RPL27P61353 136 aaKnown RBP12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 IGLV3-21P80748 117 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 UBXN2BQ14CS0 331 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 MAMDC2Q7Z304 686 aaPredicted RBP12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 BEST3Q8N1M1 668 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 STEAP2Q8NFT2 490 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 OR4D6Q8NGJ1 314 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 ST8SIA4Q92187 359 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 WNT2BQ93097 391 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 MFRPQ9BY79 579 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 WDR13Q9H1Z4 485 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 MED11Q9P086 117 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 CKLFQ9UBR5 152 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 AUP1Q9Y679 476 aa12.6□□□□□ -0.39
CACNA1A-228ENST00000636610 SLC17A2O00624 439 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 CYB5AP00167 134 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 CSRP1P21291 193 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 AVPR2P30518 371 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 MRPS21P82921 87 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 C1orf140Q5VVS0 124 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 ADGRG3Q86Y34 549 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 BPIFB2Q8N4F0 458 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 CLEC1AQ8NC01 280 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 ZNF721Q8TF20 911 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 FGGYQ96C11 551 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 RADILQ96JH8 1075 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 SLC6A7Q99884 636 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 FOXQ1Q9C009 403 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 PTGES2Q9H7Z7 377 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 PFDN2Q9UHV9 154 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 ATG2AQ2TAZ0 1938 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 FRYQ5TBA9 3013 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 TRAV36DV7A0A075B6V5 113 aa12.59□□□□□ -0.39
CACNA1A-228ENST00000636610 TMEM269A0A1B0GVZ9 245 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms