RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 SLC30A2Q9BRI3 323 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 PELOQ9BRX2 385 aaKnown RBP0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 MED10Q9BTT4 135 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 RNF126Q9BV68 326 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 CCDC94Q9BW85 323 aaPredicted RBP0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF416Q9BWM5 594 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 BBS2Q9BXC9 721 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 SRXN1Q9BYN0 137 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 ULBP1Q9BZM6 244 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 TM6SF2Q9BZW4 377 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 NAT10Q9H0A0 1025 aaKnown RBP0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 LHX5Q9H2C1 402 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 ZSCAN16Q9H4T2 348 aaPredicted RBP0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 PRORYQ9H606 182 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 CLMPQ9H6B4 373 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 ZDHHC11Q9H8X9 412 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 RDH14Q9HBH5 336 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 TM9SF3Q9HD45 589 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 C6orf50Q9HD87 102 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 PALMDQ9NP74 551 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 ASCL3Q9NQ33 180 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 MRPL40Q9NQ50 206 aaKnown RBP0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC17A5Q9NRA2 495 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 GPATCH2LQ9NWQ4 482 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 RBAKQ9NYW8 714 aaPredicted RBP0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 ATXN10Q9UBB4 475 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 WARS2Q9UGM6 360 aaKnown RBP0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 CYTH4Q9UIA0 394 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 RAB26Q9ULW5 256 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 COPS3Q9UNS2 423 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 PSG11Q9UQ72 335 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 ERVW-1Q9UQF0 538 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 RNF6Q9Y252 685 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 TP53TG5Q9Y2B4 290 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 KIF3AQ9Y496 699 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 WSB1Q9Y6I7 421 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 CLCA3PQ9Y6N3 262 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 U3KQA8 63 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 SONP18583 2426 aaKnown RBP0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 CREBBPQ92793 2442 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 LRBAP50851 2863 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 WNK1Q9H4A3 2382 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 LAMA5O15230 3695 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 ABCA1O95477 2261 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 CCDC168Q8NDH2 2452 aa0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 NSD1Q96L73 2696 aaPredicted RBP0.71□□□□□ -2.3
SMARCB1-209ENST00000635578 FLNBO75369 2602 aaKnown RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ATP8B3O60423 1300 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 MN1Q10571 1320 aaPredicted RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 DNHD1Q96M86 4753 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ITPR2Q14571 2701 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 AKAP9Q99996 3911 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 IGLV4-69A0A075B6H9 119 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 PPIAL4CA0A0B4J2A2 164 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 A0A1B0GTQ1 180 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 A0A1W2PQ67 120 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CIB4A0PJX0 185 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 A8MUI8 341 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF705EA8MWA4 302 aaPredicted RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 A8MXQ7 604 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 D6RAR5 112 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 C19orf84I3L1E1 186 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 GFYI3L273 518 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 K7ENP7 123 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 M0QYV0 167 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 LAD1O00515 517 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 PES1O00541 588 aaKnown RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 AGPAT2O15120 278 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CHADO15335 359 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 SLC31A1O15431 190 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 RGS16O15492 202 aaPredicted RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 TRAF3IP2O43734 574 aaPredicted RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 OR1F1O43749 312 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 PRKYO43930 277 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 PRPSAP2O60256 369 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CACNG3O60359 315 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 NPIPB7O75200 414 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ZNF780AO75290 641 aaPredicted RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 TM7SF2O76062 418 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ADCY5O95622 1261 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 DIRAS3O95661 229 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 OXSR1O95747 527 aaPredicted RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 AK1P00568 194 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CA1P00915 261 aaPredicted RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 IGHV3-48P01763 117 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 HLA-DRAP01903 254 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 OPN1MWP04001 364 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 IGF1P05019 195 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 KLK3P07288 261 aaPredicted RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 GIMD1P0DJR0 217 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 PPIAL4GP0DN37 164 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 OPN1MW2P0DN77 364 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 OPN1MW3P0DN78 364 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 MCF2P10911 925 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 EPB41P11171 864 aaKnown RBP0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CCL4P13236 92 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 ICAM2P13598 275 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 HPGDP15428 266 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 FUT1P19526 365 aa0.7□□□□□ -2.3
SMARCB1-209ENST00000635578 CSRP1P21291 193 aaKnown RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms