RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 LEG1Q6P5S2 330 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 GSG1LQ6UXU4 331 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 GFRALQ6UXV0 394 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 SLC25A48Q6ZT89 311 aaKnown RBP2.53□□□□□ -2
PSPC1-208ENST00000635562 GDPD3Q7L5L3 318 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 SLC36A1Q7Z2H8 476 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 TMEM219Q86XT9 240 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 RNF113BQ8IZP6 322 aaKnown RBP2.53□□□□□ -2
PSPC1-208ENST00000635562 OR6V1Q8N148 313 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 DMBX1Q8NFW5 382 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 VN1R2Q8NFZ6 395 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 OR4K1Q8NGD4 311 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 OR9Q2Q8NGE9 314 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 OR2AE1Q8NHA4 323 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 LYPD6BQ8NI32 183 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 CASTOR1Q8WTX7 329 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 SMAP2Q8WU79 429 aaPredicted RBP2.53□□□□□ -2
PSPC1-208ENST00000635562 RNF138Q8WVD3 245 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 TMED6Q8WW62 240 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 NEIL2Q969S2 332 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 UBE2E3Q969T4 207 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 BPIFA2Q96DR5 249 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 MRPL48Q96GC5 212 aaKnown RBP2.53□□□□□ -2
PSPC1-208ENST00000635562 SFRP2Q96HF1 295 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 PPP1R2P1Q96PQ5 205 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 UHRF2Q96PU4 802 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 HBEGFQ99075 208 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 ATP5SQ99766 215 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 AIF1LQ9BQI0 150 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 HCAR1Q9BXC0 346 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 SLC19A3Q9BZV2 496 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 ACTR3CQ9C0K3 210 aaPredicted RBP2.53□□□□□ -2
PSPC1-208ENST00000635562 IKZF5Q9H5V7 419 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 ARMC7Q9H6L4 198 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 WDR41Q9HAD4 459 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 EBF2Q9HAK2 575 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 TMEM27Q9HBJ8 222 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 ISYNA1Q9NPH2 558 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 GDF3Q9NR23 364 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 SDHAF2Q9NX18 166 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 OCIAD1Q9NX40 245 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 ZNF224Q9NZL3 707 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 VAPAQ9P0L0 249 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 GHRLQ9UBU3 117 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 PURGQ9UJV8 347 aaKnown RBP2.53□□□□□ -2
PSPC1-208ENST00000635562 FZR1Q9UM11 496 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 PRELID3BQ9Y3B1 194 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 ASB4Q9Y574 426 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 ETV7Q9Y603 341 aa2.53□□□□□ -2
PSPC1-208ENST00000635562 A2MP01023 1474 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.52□□□□□ -2.01
PSPC1-208ENST00000635562 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.52□□□□□ -2.01
PSPC1-208ENST00000635562 ASPDHA6ND91 283 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 TVP23AA6NH52 213 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 SRRM4A7MD48 611 aaKnown RBP2.52□□□□□ -2.01
PSPC1-208ENST00000635562 EFCAB7A8K855 629 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 PP2D1A8MPX8 630 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 E5RGE8 158 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 F5H6K3 240 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 TSTD3H0UI37 97 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 H3BMH7 237 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 C15orf65H3BRN8 121 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 TXNDC9O14530 226 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 EFNA2O43921 213 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 RAD1O60671 282 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 CTSVO60911 334 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 TDP2O95551 362 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 RAB36O95755 333 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 IFNGP01579 166 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 IGHG4P01861 327 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 MMP1P03956 469 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 PCCAP05165 728 aaPredicted RBP2.52□□□□□ -2.01
PSPC1-208ENST00000635562 PRSS2P07478 247 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 UMODP07911 640 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 RHOCP08134 193 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 NGFRP08138 427 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 CST2P09228 141 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 OR8U9P0C7N5 309 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 HIST1H1EP10412 219 aaKnown RBP2.52□□□□□ -2.01
PSPC1-208ENST00000635562 COX4I1P13073 169 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 MYOD1P15172 320 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 DPEP1P16444 411 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 ZNF17P17021 662 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 EFNA1P20827 205 aaPredicted RBP2.52□□□□□ -2.01
PSPC1-208ENST00000635562 ANOS1P23352 680 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 GABRR1P24046 479 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 CALML3P27482 149 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 HTR1FP30939 366 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 CCR7P32248 378 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 PMELP40967 661 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 TTPAP49638 278 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 HLCSP50747 726 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 VAMP7P51809 220 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 CRISP1P54107 249 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 CLDN6P56747 220 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 TAS2R39P59534 338 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 SNAP25P60880 206 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 RAP1BP61224 184 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 SPA17Q15506 151 aa2.52□□□□□ -2.01
PSPC1-208ENST00000635562 CEACAM21Q3KPI0 293 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms