RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 TFGQ92734 400 aaPredicted RBP2□□□□□ -2.09
SMARCB1-208ENST00000634926 N4BP2L2Q92802 583 aaPredicted RBP2□□□□□ -2.09
SMARCB1-208ENST00000634926 LHX4Q969G2 390 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 NABP1Q96AH0 204 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 C8orf44Q96CB5 159 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 MOCOSQ96EN8 888 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 BIRC8Q96P09 236 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 SIGLEC12Q96PQ1 595 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 OR2A5Q96R48 311 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 TNFRSF13CQ96RJ3 184 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 CHP1Q99653 195 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 TBL1YQ9BQ87 522 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 SELENOSQ9BQE4 189 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 APOL2Q9BQE5 337 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 ST6GALNAC5Q9BVH7 336 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 FAM96AQ9H5X1 160 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 VPS37BQ9H9H4 285 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 CALHM2Q9HA72 323 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 MCCC2Q9HCC0 563 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF160Q9HCG1 818 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 FAM114A2Q9NRY5 505 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 AGPAT4Q9NRZ5 378 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 TREX1Q9NSU2 369 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 DEPPQ9NTK1 212 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 CUTCQ9NTM9 273 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 C14orf105Q9NVL8 296 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 RDH8Q9NYR8 311 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 EIF3KQ9UBQ5 218 aaKnown RBP2□□□□□ -2.09
SMARCB1-208ENST00000634926 CACNG5Q9UF02 275 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 CHRNA9Q9UGM1 479 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 SLC2A6Q9UGQ3 507 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 RSPH14Q9UHP6 348 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 EIF3LQ9Y262 564 aaKnown RBP2□□□□□ -2.09
SMARCB1-208ENST00000634926 EXOGQ9Y2C4 368 aaKnown RBP2□□□□□ -2.09
SMARCB1-208ENST00000634926 SLC9A8Q9Y2E8 581 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 MEMO1Q9Y316 297 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 DHRS7Q9Y394 339 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 HYOU1Q9Y4L1 999 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 AP4B1Q9Y6B7 739 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 DNAH3Q8TD57 4116 aa2□□□□□ -2.09
SMARCB1-208ENST00000634926 EML6Q6ZMW3 1958 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 IGLV7-46A0A075B6I9 117 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 KCNE1BA0A087WTH5 132 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 A0A0J9YVX5 310 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 TRIM64CA6NLI5 447 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 LRRC30A6NM36 301 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 IQCF5A8MTL0 148 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 A8MUI8 341 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 C4orf51C9J302 202 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 K7EQM0 130 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SRPX2O60687 465 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 PSIP1O75475 530 aaKnown RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ZNF189O75820 626 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 NSA2O95478 260 aaKnown RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 C1orf105O95561 183 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ANP32DO95626 131 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 FTH1P02794 183 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 OR9G9P0C7N8 305 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 GSTT2P0CG29 244 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 GSTT2BP0CG30 244 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 RALBP11234 206 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 COX6B1P14854 86 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 RPA2P15927 270 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ATP6V1C1P21283 382 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 UCP1P25874 307 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 MSNP26038 577 aaKnown RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SAA4P35542 130 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 GRIA1P42261 906 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 MAGEA6P43360 314 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 OR1D4P47884 311 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SRPXP78539 464 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 CALCOCO2Q13137 446 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 FAM53BQ14153 422 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 POU6F1Q14863 301 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ARHGAP19Q14CB8 494 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SIX1Q15475 284 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 MS4A18Q3C1V0 323 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 FILIP1LQ4L180 1135 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 CYBRD1Q53TN4 286 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 VWA2Q5GFL6 755 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 MUC21Q5SSG8 566 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 BEND6Q5SZJ8 279 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 MLIPQ5VWP3 458 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SASS6Q6UVJ0 657 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SHISA6Q6ZSJ9 500 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 LANCL3Q6ZV70 420 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 PID1Q7Z2X4 250 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 DOLPP1Q86YN1 238 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 CCDC71Q8IV32 467 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 CDKL3Q8IVW4 592 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 VSTM4Q8IW00 320 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 CENPSQ8N2Z9 138 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 RPRMLQ8N4K4 120 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 SAMD12Q8N8I0 201 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ZFP62Q8NB50 900 aaPredicted RBP1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 APCDD1LQ8NCL9 501 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 OR4F17Q8NGA8 305 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 OR8K1Q8NGG5 319 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 ASZ1Q8WWH4 475 aa1.99□□□□□ -2.09
SMARCB1-208ENST00000634926 GTF3AQ92664 365 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms