RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 SEC22AQ96IW7 307 aa6.75□□□□□ -1.33
PKP4-217ENST00000628904 DPCDQ9BVM2 203 aaPredicted RBP6.75□□□□□ -1.33
PKP4-217ENST00000628904 HES7Q9BYE0 225 aa6.75□□□□□ -1.33
PKP4-217ENST00000628904 LOXL2Q9Y4K0 774 aa6.75□□□□□ -1.33
PKP4-217ENST00000628904 HRH3Q9Y5N1 445 aa6.75□□□□□ -1.33
PKP4-217ENST00000628904 TMEM14AQ9Y6G1 99 aa6.75□□□□□ -1.33
PKP4-217ENST00000628904 LTBP2Q14767 1821 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 ALG1L2C9J202 215 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 TLX3O43711 291 aaPredicted RBP6.74□□□□□ -1.33
PKP4-217ENST00000628904 GMDSO60547 372 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 SLC19A2O60779 497 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 AMY2AP04746 511 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 SERPINA2P20848 420 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 STARD6P59095 220 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 INSM1Q01101 510 aaPredicted RBP6.74□□□□□ -1.33
PKP4-217ENST00000628904 CLPPQ16740 277 aaPredicted RBP6.74□□□□□ -1.33
PKP4-217ENST00000628904 SLC36A2Q495M3 483 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 TMEM53Q6P2H8 277 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 TRILQ7L0X0 811 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 SLC16A9Q7RTY1 509 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 SLC26A10Q8NG04 563 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 OR2AE1Q8NHA4 323 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 SAP25Q8TEE9 199 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 ZNF431Q8TF32 576 aaPredicted RBP6.74□□□□□ -1.33
PKP4-217ENST00000628904 ZNF486Q96H40 463 aaPredicted RBP6.74□□□□□ -1.33
PKP4-217ENST00000628904 CCDC120Q96HB5 630 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 SELENOIQ9C0D9 397 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 RBFOX1Q9NWB1 397 aaKnown RBP6.74□□□□□ -1.33
PKP4-217ENST00000628904 PARPBPQ9NWS1 579 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 MGAT4AQ9UM21 535 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 LRP12Q9Y561 859 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 OTOGLQ3ZCN5 2332 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 LOC107986453A0A1B0GWG9 222 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 SLC43A1O75387 559 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 CRTAPO75718 401 aaPredicted RBP6.74□□□□□ -1.33
PKP4-217ENST00000628904 DBHP09172 617 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 MTNR1BP49286 362 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 PNLIPRP2P54317 469 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 GPR50Q13585 617 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 RAB11BQ15907 218 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 OVCH1Q7RTY7 1134 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 MCEMP1Q8IX19 187 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 APCDD1LQ8NCL9 501 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 NARS2Q96I59 477 aaKnown RBP6.74□□□□□ -1.33
PKP4-217ENST00000628904 DEFB127Q9H1M4 99 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 IFT46Q9NQC8 304 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 MGAT4CQ9UBM8 478 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 MED13Q9UHV7 2174 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 IFITM5A6NNB3 132 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 ZNF878C9JN71 531 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 KLF4O43474 513 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 CER1O95813 267 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 B4GALT1P15291 398 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 GABRR1P24046 479 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 SSR4P51571 173 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 GAS1P54826 345 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 AKIRIN2Q53H80 203 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 PMS2CLQ68D20 193 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 PYHIN1Q6K0P9 492 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 DNM1P34Q6PK57 102 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 SLITRK4Q8IW52 837 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 NUDCD2Q8WVJ2 157 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 C11orf40Q8WZ69 217 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 LIN37Q96GY3 246 aaPredicted RBP6.74□□□□□ -1.33
PKP4-217ENST00000628904 MNTQ99583 582 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 ULBP2Q9BZM5 246 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 METTL17Q9H7H0 456 aaPredicted RBP6.74□□□□□ -1.33
PKP4-217ENST00000628904 EXOGQ9Y2C4 368 aaKnown RBP6.74□□□□□ -1.33
PKP4-217ENST00000628904 RHBDD3Q9Y3P4 386 aa6.74□□□□□ -1.33
PKP4-217ENST00000628904 CCSO14618 274 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 ADAM10O14672 748 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 PIN1P1O15428 100 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 PLPP2O43688 288 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 IGHA1P01876 353 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 TCRBP04435 133 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 STOMP27105 288 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 DLSTP36957 453 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 DCAF7P61962 342 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 ABHD17BQ5VST6 288 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 OR52W1Q6IF63 320 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 AKR7LQ8NHP1 331 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 AKAP1Q92667 903 aaKnown RBP eCLIP6.73□□□□□ -1.33
PKP4-217ENST00000628904 SPACA9Q96E40 222 aaPredicted RBP6.73□□□□□ -1.33
PKP4-217ENST00000628904 MVB12AQ96EY5 273 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 TMEM43Q9BTV4 400 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 CHMP1AQ9HD42 196 aaPredicted RBP6.73□□□□□ -1.33
PKP4-217ENST00000628904 POLE3Q9NRF9 147 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 DSPP15924 2871 aaKnown RBP6.73□□□□□ -1.33
PKP4-217ENST00000628904 SLC22A23A1A5C7 686 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 D6RAR5 112 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 IGKV3-11P04433 115 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 CD79AP11912 226 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 CRABP1P29762 137 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 CSNK1A1P48729 337 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 DUSP3P51452 185 aaPredicted RBP6.73□□□□□ -1.33
PKP4-217ENST00000628904 CCL11P51671 97 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 CLDN20P56880 219 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 PITPNAQ00169 270 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 MAB21L1Q13394 359 aa6.73□□□□□ -1.33
PKP4-217ENST00000628904 SHBQ15464 509 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms