RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 DCAF12Q5T6F0 453 aa17.6■□□□□ 0.41
PCDHB11-202ENST00000624887 NTNG2Q96CW9 530 aa17.6■□□□□ 0.41
PCDHB11-202ENST00000624887 HAVCR1Q96D42 359 aa17.6■□□□□ 0.41
PCDHB11-202ENST00000624887 C7orf50Q9BRJ6 194 aaKnown RBP17.6■□□□□ 0.41
PCDHB11-202ENST00000624887 OR2B2Q9GZK3 357 aa17.6■□□□□ 0.41
PCDHB11-202ENST00000624887 ZNF160Q9HCG1 818 aa17.6■□□□□ 0.41
PCDHB11-202ENST00000624887 SH2D2AQ9NP31 389 aa17.6■□□□□ 0.41
PCDHB11-202ENST00000624887 STEAP1Q9UHE8 339 aa17.6■□□□□ 0.41
PCDHB11-202ENST00000624887 CFAP54Q96N23 3096 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 SULT1B1O43704 296 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 IGHEP01854 428 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 CD63P08962 238 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 CCL3P10147 92 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 ARSBP15848 533 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 CSRP1P21291 193 aaKnown RBP17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 ART1P52961 327 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 TMEM176BQ3YBM2 270 aaPredicted RBP17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 ZFP69Q49AA0 526 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 LINGO2Q7L985 606 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 RPS19BP1Q86WX3 136 aaKnown RBP17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 ZNF227Q86WZ6 799 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 LINC00346Q8IVM7 164 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 ARMC10Q8N2F6 343 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 GTPBP8Q8N3Z3 284 aaPredicted RBP17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 PAQR8Q8TEZ7 354 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 ASB5Q8WWX0 329 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 DPAGT1Q9H3H5 408 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 PLEKHA1Q9HB21 404 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 FOXJ3Q9UPW0 622 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 RBMX2Q9Y388 322 aaKnown RBP17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 FAM172BPA6NC97 362 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 TTLL8A6PVC2 850 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 TRAF3IP2O43734 574 aaPredicted RBP17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 STK17BO94768 372 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 SFTPDP35247 375 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 MLF1P58340 268 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 DYRK1AQ13627 763 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 KLF9Q13886 244 aaPredicted RBP17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 SERPINA12Q8IW75 414 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 RNF133Q8WVZ7 376 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 C11orf40Q8WZ69 217 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 SLC25A44Q96H78 314 aaPredicted RBP17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 AUNIPQ9H7T9 357 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 PROK2Q9HC23 129 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 DDX28Q9NUL7 540 aaKnown RBP17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 FBXL3Q9UKT7 428 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 DHDHQ9UQ10 334 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 EMC9Q9Y3B6 208 aa17.59■□□□□ 0.41
PCDHB11-202ENST00000624887 LNP1A1A4G5 178 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 H0YC42 278 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 GABARAPH6UMI1 98 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 GALR2O43603 387 aaPredicted RBP17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 RAD1O60671 282 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 IGHG1P01857 330 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 PGA4P0DJD7 388 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 PGA3P0DJD8 388 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 GDNFP39905 211 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 MNDAP41218 407 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 PTH2RP49190 550 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 TMEM225Q6GV28 225 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 HDDC2Q7Z4H3 204 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 GPAT4Q86UL3 456 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 OXGR1Q96P68 337 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 RANGRFQ9HD47 186 aaPredicted RBP17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 G6PC2Q9NQR9 355 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 LOXL2Q9Y4K0 774 aa17.58■□□□□ 0.4
PCDHB11-202ENST00000624887 LOC102725191A0A1B0GVB3 256 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 ZNF814B7Z6K7 855 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 ISG15P05161 165 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 LAP3P28838 519 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 RCVRNP35243 200 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 CLRN1P58418 232 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 GPR85P60893 370 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 TMEM69Q5SWH9 247 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 SLC22A10Q63ZE4 541 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 ASPHD2Q6ICH7 369 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 TMEM156Q8N614 296 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 NOXO1Q8NFA2 376 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 OR10H5Q8NGA6 315 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 OR6X1Q8NH79 312 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 COPZ2Q9P299 210 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 CYB5R1Q9UHQ9 305 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 OR52A1Q9UKL2 312 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 PADI1Q9ULC6 663 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 AQP7P3A6NL99 342 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 TPPPO94811 219 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 CD2P06729 351 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 LIFP15018 202 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 CDK2P24941 298 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 RPS15P62841 145 aaKnown RBP17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 SLC35A1P78382 337 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 CAMK2DQ13557 499 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 MTFR2Q6P444 385 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 CORO6Q6QEF8 472 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 TMPPEQ6ZT21 453 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 LILRB4Q8NHJ6 448 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 DMRTB1Q96MA1 342 aa17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 FYTTD1Q96QD9 318 aaKnown RBP17.57■□□□□ 0.4
PCDHB11-202ENST00000624887 TP63Q9H3D4 680 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms