RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 COPS3Q9UNS2 423 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 ERGIC3Q9Y282 383 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 ZFYVE26Q68DK2 2539 aa15.68■□□□□ 0.1
PTCHD3-202ENST00000622555 HSPB2A8KAH6 182 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 ZNF99A8MXY4 864 aaPredicted RBP15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 ZNF670-ZNF695F2Z2N8 137 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 LIMS3P0CW19 117 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 LIMS4P0CW20 117 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 B4GALT1P15291 398 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 FOXG1P55316 489 aaPredicted RBP15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 ARF1P84077 181 aaKnown RBP15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 IRF3Q14653 427 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 STK11Q15831 433 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 HSPB2Q16082 182 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 KCNMB1Q16558 191 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 SYT6Q5T7P8 510 aaPredicted RBP15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 TMEM211Q6ICI0 200 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 ATCAYQ86WG3 371 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 RFLNBQ8N5W9 214 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 NABP1Q96AH0 204 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 BBC3Q96PG8 261 aaPredicted RBP15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 TTTY10Q9BZA0 68 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 KCNG2Q9UJ96 466 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 LAMP5Q9UJQ1 280 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 MEMO1Q9Y316 297 aa15.67■□□□□ 0.1
PTCHD3-202ENST00000622555 A0A0G2JNJ9 132 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 MYL12BO14950 172 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 INMTO95050 263 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 CGAP01215 116 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 NPR2P20594 1047 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 ZNF85Q03923 595 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 TBCEQ15813 527 aaPredicted RBP15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 RNLSQ5VYX0 342 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 ZNF813Q6ZN06 617 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 LINC00346Q8IVM7 164 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 LRRC18Q8N456 261 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 OTOSQ8NHW6 89 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 DMRTA2Q96SC8 542 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 MNTQ99583 582 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 ALG8Q9BVK2 526 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 OPN3Q9H1Y3 402 aaPredicted RBP15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 SIAEQ9HAT2 523 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 Q9UFV3 132 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 KLHDC2Q9Y2U9 406 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 TMEM14AQ9Y6G1 99 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 PCNX1Q96RV3 2341 aa15.66■□□□□ 0.1
PTCHD3-202ENST00000622555 TMCC2O75069 709 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 CNOT4O95628 575 aaKnown RBP15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 MPGP29372 298 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 OPRM1P35372 400 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 EIF2B1Q14232 305 aaKnown RBP15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 GALEQ14376 348 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 ESPL1Q14674 2120 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 TEX30Q5JUR7 227 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 Q6ZT83 130 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 SSX6Q7RTT6 188 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 RAB2BQ8WUD1 216 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 THEM6Q8WUY1 208 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 RND1Q92730 232 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 ZNF416Q9BWM5 594 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 MND1Q9BWT6 205 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 ACOT13Q9NPJ3 140 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 CCL21O00585 134 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 PTHP01270 115 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 ITGA5P08648 1049 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 CD8BP10966 210 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 ALOX5APP20292 161 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 LSM6P62312 80 aaKnown RBP15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 TLE1Q04724 770 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 PCK2Q16822 640 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 FAM27BQ5VT28 67 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 SLC18B1Q6NT16 456 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 CORO6Q6QEF8 472 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 KLHL24Q6TFL4 600 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 ANKRD13BQ86YJ7 626 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 SLC22A24Q8N4F4 322 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 KLHL36Q8N4N3 616 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 NANOGP1Q8N7R0 232 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 ZNF454Q8N9F8 522 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 ZNF610Q8N9Z0 462 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 OR2AJ1Q8NGZ0 328 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 SH3GL3Q99963 347 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 BCL7BQ9BQE9 202 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 ZNF649Q9BS31 505 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 CYB5R1Q9UHQ9 305 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 LHFPL6Q9Y693 200 aa15.65■□□□□ 0.1
PTCHD3-202ENST00000622555 TMEM129A0AVI4 362 aa15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 PHYHO14832 338 aa15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 FARS2O95363 451 aaKnown RBP15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 IL18BPO95998 194 aa15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 PRB1P04280 392 aa15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 OR8G3PP0DMU2 310 aa15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 BMP5P22003 454 aa15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 CD79BP40259 229 aa15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 ENDOGQ14249 297 aaKnown RBP15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 OR2G6Q5TZ20 316 aa15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 SLC16A12Q6ZSM3 486 aa15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 DCXRQ7Z4W1 244 aa15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 SNX33Q8WV41 574 aa15.64■□□□□ 0.09
PTCHD3-202ENST00000622555 RORBQ92753 470 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms