RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 KLHL15Q96M94 604 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 ZNF416Q9BWM5 594 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 TTTY12Q9BZ98 90 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 FGF20Q9NP95 211 aaPredicted RBP9.36□□□□□ -0.91
VPS11-208ENST00000621676 ZFP64Q9NPA5 681 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 ELF5Q9UKW6 265 aaPredicted RBP9.36□□□□□ -0.91
VPS11-208ENST00000621676 POLHQ9Y253 713 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 LRP12Q9Y561 859 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 OR2T7P0C7T2 308 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 SLC2A5P22732 501 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 CSNK1A1P48729 337 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 RPS4XP62701 263 aaKnown RBP9.36□□□□□ -0.91
VPS11-208ENST00000621676 MOGQ16653 247 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 ARMC4Q5T2S8 1044 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 MCEMP1Q8IX19 187 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 OR51D1Q8NGF3 324 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 OR10K1Q8NGX5 313 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 OR2T27Q8NH04 317 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 OR8S1Q8NH09 359 aa9.36□□□□□ -0.91
VPS11-208ENST00000621676 INTS12Q96CB8 462 aaKnown RBP9.36□□□□□ -0.91
VPS11-208ENST00000621676 LRRC3CA6NJW4 275 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 EEF1E1O43324 174 aaKnown RBP9.35□□□□□ -0.91
VPS11-208ENST00000621676 ICAM2P13598 275 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 IL32P24001 234 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 HOXA4Q00056 320 aaPredicted RBP9.35□□□□□ -0.91
VPS11-208ENST00000621676 HSD17B12Q53GQ0 312 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 AAED1Q7RTV5 226 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 TIGD4Q8IY51 512 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 CELF2-AS1Q8N7Q2 184 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 UXS1Q8NBZ7 420 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 FGGYQ96C11 551 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 MRGPRX4Q96LA9 322 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 DOK1Q99704 481 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 PSD2Q9BQI7 771 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 SLC30A2Q9BRI3 323 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 TIMMDC1Q9NPL8 285 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 LOC102723996A0A087X1L8 192 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 TMEM129A0AVI4 362 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 ARPC3O15145 178 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 NPIPB7O75200 414 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 ALOX5APP20292 161 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 GABRA5P31644 462 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 CEACAM16Q2WEN9 425 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 ZNF766Q5HY98 468 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 BRICD5Q6PL45 260 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 KLHL24Q6TFL4 600 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 RTN4RL2Q86UN3 420 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 FGFBP3Q8TAT2 258 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 M1APQ8TC57 530 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 ST8SIA1Q92185 356 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 RNF32Q9H0A6 362 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 RNF121Q9H920 327 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 EXOSC3Q9NQT5 275 aaKnown RBP9.35□□□□□ -0.91
VPS11-208ENST00000621676 ENAMQ9NRM1 1142 aa9.35□□□□□ -0.91
VPS11-208ENST00000621676 RBMX2Q9Y388 322 aaKnown RBP9.35□□□□□ -0.91
VPS11-208ENST00000621676 SF3B6Q9Y3B4 125 aaKnown RBP9.35□□□□□ -0.91
VPS11-208ENST00000621676 A0A1W2PQD3 144 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 ANXA2P2A6NMY6 339 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 PIN1P1O15428 100 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 EFSO43281 561 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 DXOO77932 396 aaKnown RBP9.34□□□□□ -0.91
VPS11-208ENST00000621676 IGHG1P01857 330 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 ATF1P18846 271 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 ELK1P19419 428 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 DSCR4P56555 118 aaPredicted RBP9.34□□□□□ -0.91
VPS11-208ENST00000621676 PER3P56645 1201 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 ZNF829Q3KNS6 432 aaPredicted RBP9.34□□□□□ -0.91
VPS11-208ENST00000621676 OR2G2Q8NGZ5 317 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 PIGQQ9BRB3 760 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 MCUBQ9NWR8 336 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 PLEKHB1Q9UF11 243 aaPredicted RBP9.34□□□□□ -0.91
VPS11-208ENST00000621676 KLHL21Q9UJP4 597 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 RGS9O75916 674 aaPredicted RBP9.34□□□□□ -0.91
VPS11-208ENST00000621676 ZNF205O95201 554 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 PIPP12273 146 aaPredicted RBP9.34□□□□□ -0.91
VPS11-208ENST00000621676 HSF2Q03933 536 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 CDK5R1Q15078 307 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 RGS21Q2M5E4 152 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 LCN1P1Q5VSP4 162 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 SLC18B1Q6NT16 456 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 BPHLQ86WA6 291 aaPredicted RBP9.34□□□□□ -0.91
VPS11-208ENST00000621676 PRSS35Q8N3Z0 413 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 RPRMLQ8N4K4 120 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 RGP1Q92546 391 aaPredicted RBP9.34□□□□□ -0.91
VPS11-208ENST00000621676 DTNBP1Q96EV8 351 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 MAP6Q96JE9 813 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 ABI3Q9P2A4 366 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 ZNF319Q9P2F9 582 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 A0A1W2PQ09 198 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 E9PQ18 207 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 TGM6O95932 706 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 HPP00738 406 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 EIF4EP06730 217 aaKnown RBP9.34□□□□□ -0.91
VPS11-208ENST00000621676 FAM87AP0C7U9 286 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 RAB3BP20337 219 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 ZNF774Q6NX45 483 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 BEST4Q8NFU0 473 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 MFSD8Q8NHS3 518 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 ASB10Q8WXI3 467 aa9.34□□□□□ -0.91
VPS11-208ENST00000621676 BORCS5Q969J3 196 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 286.3 ms