RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	NPIPB9	F8W1W9	429 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	EIF1AY	O14602	144 aa	Known RBP	13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	XRCC3	O43542	346 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	GLA	P06280	429 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	EGR4	Q05215	589 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	RAB11B	Q15907	218 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	MANEA	Q5SRI9	462 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	PRAMEF17	Q5VTA0	474 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	CHRDL2	Q6WN34	429 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	TTLL10	Q6ZVT0	673 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	SVBP	Q8N300	66 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	SLC43A2	Q8N370	569 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	OR6N1	Q8NGY5	312 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	FAM3D	Q96BQ1	224 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	CMKLR1	Q99788	373 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	PDCD10	Q9BUL8	212 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	HIF3A	Q9Y2N7	669 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	SLCO1B1	Q9Y6L6	691 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644		A0A1B0GTQ1	180 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	CDC40	O60508	579 aa	Known RBP eCLIP	13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	CTAG2	O75638	210 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	FREM3	P0C091	2139 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	FAM122B	Q7Z309	247 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	OR2W3	Q7Z3T1	314 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	ATG4D	Q86TL0	474 aa	Predicted RBP	13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	MARCH3	Q86UD3	253 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	CCDC36	Q8IYA8	594 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	ZNF595	Q8IYB9	648 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	WNT2B	Q93097	391 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	PIGM	Q9H3S5	423 aa		13.06	□□□□□ -0.32
SMTN-223	ENST00000619644	KANTR	A0A1W2PQU2	76 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644		H7C417	338 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	AMY2A	P04746	511 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	IL12B	P29460	328 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	RPS4X	P62701	263 aa	Known RBP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	ADAM8	P78325	824 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	SPOCK1	Q08629	439 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	LIN54	Q6MZP7	749 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	TMEM205	Q6UW68	189 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	C2CD4C	Q8TF44	421 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	TSLP	Q969D9	159 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	PTDSS2	Q9BVG9	487 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	APMAP	Q9HDC9	416 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	MTFP1	Q9UDX5	166 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	PCDHB10	Q9UN67	800 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	ETV7	Q9Y603	341 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	ASXL3	Q9C0F0	2248 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644		A0A0D9SG52	128 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	KIR2DS5	A0A0G2JLQ3	304 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644		A0A0G2JNG1	304 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	TMEM218	A2RU14	115 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	KIR2DS3	K7RE56	304 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	ICOSLG	O75144	302 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	AKAIN1	P0CW23	69 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	ADCYAP1	P18509	176 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	ALOX5AP	P20292	161 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	RFC3	P40938	356 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	EIF1AX	P47813	144 aa	Known RBP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	POLR2G	P62487	172 aa	Known RBP eCLIP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	PPIA	P62937	165 aa	Known RBP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	ZP2	Q05996	745 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	KIR2DS5	Q14953	304 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	KLHL26	Q53HC5	615 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	CDC20B	Q86Y33	519 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	OR1M1	Q8NGA1	313 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	OR1S2	Q8NGQ3	325 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	C15orf40	Q8WUR7	153 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	RNF166	Q96A37	237 aa	Predicted RBP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	SEC22A	Q96IW7	307 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	MICU1	Q9BPX6	476 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	CMSS1	Q9BQ75	279 aa	Known RBP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	ZNF471	Q9BX82	626 aa	Predicted RBP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	POFUT1	Q9H488	388 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	PRODH2	Q9UF12	536 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	FBXO4	Q9UKT5	387 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	DHDH	Q9UQ10	334 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	KIF26B	Q2KJY2	2108 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	TMEM212	A6NML5	194 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	CD1A	P06126	327 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	CSF1	P09603	554 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	RORA	P35398	523 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	NR0B1	P51843	470 aa	Known RBP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	GFER	P55789	205 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	LY6G6F	Q5SQ64	297 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	GLYATL3	Q5SZD4	288 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	HLA-DQA1	Q5Y7H0	255 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	STEAP1B	Q6NZ63	245 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	DNM1P46	Q6ZS02	220 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	CD163	Q86VB7	1156 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	BEST3	Q8N1M1	668 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	FAM160A2	Q8N612	972 aa	Predicted RBP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	RTN4R	Q9BZR6	473 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	DZANK1	Q9NVP4	752 aa		13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	DHCR7	Q9UBM7	475 aa	Known RBP	13.05	□□□□□ -0.32
SMTN-223	ENST00000619644	EPOP	A6NHQ4	379 aa		13.04	□□□□□ -0.32
SMTN-223	ENST00000619644	LINC00587	B1AMM8	73 aa		13.04	□□□□□ -0.32
SMTN-223	ENST00000619644	CCS	O14618	274 aa		13.04	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms