RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 KCNF1Q9H3M0 494 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 GCM1Q9NP62 436 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 BRD7Q9NPI1 651 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 NDRG4Q9ULP0 352 aaKnown RBP3.78□□□□□ -1.8
SNCA-213ENST00000618500 FZR1Q9UM11 496 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 CHST2Q9Y4C5 530 aa3.78□□□□□ -1.8
SNCA-213ENST00000618500 A0A1B0GVI7 797 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 LRRC30A6NM36 301 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 EREGO14944 169 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 TPD52L2O43399 206 aaKnown RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 AHCYL1O43865 530 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 SLC22A3O75751 556 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 TOX4O94842 621 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 IGHV4-59P01825 116 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 VIMP08670 466 aaKnown RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 SBK2P0C263 348 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 ETS2P15036 469 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 RAC2P15153 192 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 IL7RP16871 459 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 PAICSP22234 425 aaKnown RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 MRPL19P49406 292 aaKnown RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 CRISP3P54108 245 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 SLC35A2P78381 396 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 EGR3Q06889 387 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 KRTAP27-1Q3LI81 207 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 CFAP157Q5JU67 520 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 FAM219BQ5XKK7 198 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 WDR88Q6ZMY6 472 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 TRMT10CQ7L0Y3 403 aaKnown RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 OR5J2Q8NH18 312 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 SLC25A40Q8TBP6 338 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 MEGF10Q96KG7 1140 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 TMEM246Q9BRR3 403 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 SLC35A5Q9BS91 424 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 ALG12Q9BV10 488 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 KCNN2Q9H2S1 579 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 RAD21L1Q9H4I0 556 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 PSMC3IPQ9P2W1 217 aaPredicted RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 HAO1Q9UJM8 370 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 PRPF19Q9UMS4 504 aaKnown RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 HERC2O95714 4834 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 IQCF6A8MYZ5 107 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 SPRY3O43610 288 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 ZNF500O60304 480 aaPredicted RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 FBXO24O75426 580 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 SLC6A1P30531 599 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 RPS5P46782 204 aaKnown RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 GP2P55259 537 aaKnown RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 ERVS71-1P61550 626 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 RPS26P62854 115 aaKnown RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 COX10Q12887 443 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 UAP1Q16222 522 aaPredicted RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 FAM27BQ5VT28 67 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 TEX36Q5VZQ5 186 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 NCR3LG1Q68D85 454 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 SLC16A14Q7RTX9 510 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 OR5AK3PQ8NH89 298 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 ZNF566Q969W8 418 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 ZNF583Q96ND8 569 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 MCRIP2Q9BUT9 160 aaKnown RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 PCDHAC1Q9H158 963 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 CCNB1IP1Q9NPC3 277 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 ADPRHL2Q9NX46 363 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 MARCOQ9UEW3 520 aaPredicted RBP3.77□□□□□ -1.81
SNCA-213ENST00000618500 BAIAP2L1Q9UHR4 511 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 PPP1R3CQ9UQK1 317 aa3.77□□□□□ -1.81
SNCA-213ENST00000618500 DNAH6Q9C0G6 4158 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 A0A0B4J2E0 115 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 A0A1B0GX12 115 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 CFLARO15519 480 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 IGHG1P01857 330 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 CHATP28329 748 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 GABRA5P31644 462 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 RYKP34925 604 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 GDI2P50395 445 aaKnown RBP3.76□□□□□ -1.81
SNCA-213ENST00000618500 MVDP53602 400 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 PCLAFQ15004 111 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 METTL11BQ5VVY1 283 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 OGFOD2Q6N063 350 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 ZNF613Q6PF04 617 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 LRFN4Q6PJG9 635 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 Q6ZR03 302 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 CALHM3Q86XJ0 350 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 VRK2Q86Y07 508 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 HIPK4Q8NE63 616 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 OR4K5Q8NGD3 323 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 OR6N1Q8NGY5 312 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 CLHC1Q8NHS4 586 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 ZG16BQ96DA0 208 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 ZNF426Q9BUY5 554 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 DNTTIP1Q9H147 329 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 CACYBPQ9HB71 228 aaKnown RBP3.76□□□□□ -1.81
SNCA-213ENST00000618500 CLN8Q9UBY8 286 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 SOX21Q9Y651 276 aaPredicted RBP3.76□□□□□ -1.81
SNCA-213ENST00000618500 ALPK2Q86TB3 2170 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 A0A0U1RQK1 487 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 CLDN24A6NM45 220 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 VGLL3A8MV65 326 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 C22orf46C9J442 243 aa3.76□□□□□ -1.81
SNCA-213ENST00000618500 M0R1W7 72 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms