RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 SCN5AQ14524 2016 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 CDRT15L2A8MXV6 281 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 DEGS1O15121 323 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 FUT2Q10981 343 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 STPG2Q8N412 459 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 DTWD2Q8NBA8 298 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 OR1L3Q8NH93 324 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 MRPS28Q9Y2Q9 187 aaKnown RBP13.87□□□□□ -0.19
COL5A1-208ENST00000618395 GLCEO94923 617 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 HSD17B13Q7Z5P4 300 aaPredicted RBP13.87□□□□□ -0.19
COL5A1-208ENST00000618395 OR2L13Q8N349 312 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 SLC46A1Q96NT5 459 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 LMF2Q9BU23 707 aaKnown RBP13.87□□□□□ -0.19
COL5A1-208ENST00000618395 MED20Q9H944 212 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 HES4Q9HCC6 221 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 CLEC2DQ9UHP7 191 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 FEZF1A0PJY2 475 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 TAS2R60P59551 318 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF813Q6ZN06 617 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 TMEM251Q8N6I4 163 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 NTPCRQ9BSD7 190 aaKnown RBP13.87□□□□□ -0.19
COL5A1-208ENST00000618395 WSB1Q9Y6I7 421 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 NAV1Q8NEY1 1877 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 TCN2P20062 427 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF626Q68DY1 528 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 LANCL3Q6ZV70 420 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF689Q96CS4 500 aaPredicted RBP13.86□□□□□ -0.19
COL5A1-208ENST00000618395 CLSTN3Q9BQT9 956 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF343Q6P1L6 599 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 WDR88Q6ZMY6 472 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 LYG2Q86SG7 212 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 FBXL6Q8N531 539 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 THOC3Q96J01 351 aaKnown RBP13.86□□□□□ -0.19
COL5A1-208ENST00000618395 OR2D2Q9H210 308 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 WDR76Q9H967 626 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 OR5K3A6NET4 321 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 B4DEV8 164 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 GPR25O00155 361 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 KIR2DL3P43628 341 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 GPR12P47775 334 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 RAC1P63000 192 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 LTB4RQ15722 352 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 FAM109BQ6ICB4 259 aaPredicted RBP13.86□□□□□ -0.19
COL5A1-208ENST00000618395 OR10J5Q8NHC4 309 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 MRGPRX2Q96LB1 330 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 F2RL3Q96RI0 385 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 TGM5O43548 720 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 SMIM17P0DL12 118 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 SLC25A4P12235 298 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 CRISP2P16562 243 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 LAG3P18627 525 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 BMP5P22003 454 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 C19orf57Q0VDD7 668 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 SHHQ15465 462 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 KLK6Q92876 244 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 ISL2Q96A47 359 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 SLC46A2Q9BY10 475 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 AP5S1Q9NUS5 200 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 PADI3Q9ULW8 664 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF860A6NHJ4 632 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 OR52A4PA6NMU1 304 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 SLC10A3P09131 477 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF385BQ569K4 471 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 NANOGP1Q8N7R0 232 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 VN1R17PQ8TDU5 208 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 MOKQ9UQ07 419 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 DEFA4P12838 97 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 SDHBP21912 280 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 HLXQ14774 488 aaPredicted RBP13.86□□□□□ -0.19
COL5A1-208ENST00000618395 RPEL1Q2QD12 228 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 DEFB134Q4QY38 66 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 DPPA3Q6W0C5 159 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 BVESQ8NE79 360 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 TTC9Q92623 222 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 DHRS4Q9BTZ2 278 aa13.86□□□□□ -0.19
COL5A1-208ENST00000618395 MMP15P51511 669 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 DGCR2P98153 550 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 EIF4E3Q8N5X7 224 aaKnown RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 ANAPC16Q96DE5 110 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 BARX1Q9HBU1 254 aaPredicted RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 CRYBA1P05813 215 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF888P0CJ79 500 aaPredicted RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF468Q5VIY5 522 aaPredicted RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF765Q7L2R6 523 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 OR4C16Q8NGL9 310 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 TMEM129A0AVI4 362 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 SLC38A8A6NNN8 435 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 TNFRSF10CO14798 259 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 FCGR2AP12318 317 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 SSX1Q16384 188 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 OR52L2PQ8NGH6 319 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 WFIKKN2Q8TEU8 576 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 RHOVQ96L33 236 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 CDCP1Q9H5V8 836 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 CRYM-AS1A6NIL9 109 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 WNT10BO00744 389 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 EIF4EP06730 217 aaKnown RBP13.85□□□□□ -0.19
COL5A1-208ENST00000618395 OR4Q2P0C623 313 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 GCH1P30793 250 aa13.85□□□□□ -0.19
COL5A1-208ENST00000618395 CXCL9Q07325 125 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms