RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 IL17RDQ8NFM7 739 aa15.44■□□□□ 0.06
PCDHGC3-205ENST00000617641 OR10H5Q8NGA6 315 aa15.44■□□□□ 0.06
PCDHGC3-205ENST00000617641 ZNF671Q8TAW3 534 aa15.44■□□□□ 0.06
PCDHGC3-205ENST00000617641 LOC102725191A0A1B0GVB3 256 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 IFITM5A6NNB3 132 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 EIF1AYO14602 144 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 TNFSF11O14788 317 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 HLA-DQB1P01920 261 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 ADRA2CP18825 462 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 LAP3P28838 519 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 SRD5A2P31213 254 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 EIF1AXP47813 144 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 CLDN17P56750 224 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 RAC1P63000 192 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 CSRP2Q16527 193 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 CARTPTQ16568 116 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 HDDC2Q7Z4H3 204 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 TSEN15Q8WW01 171 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 SLITRK2Q9H156 845 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 SEC61A2Q9H9S3 476 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 CENPMQ9NSP4 180 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 RYDENQ9NUL5 291 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 V9GY05 133 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 ZNF726A6NNF4 738 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 AIPO00170 330 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 SRSF10O75494 262 aaKnown RBP15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 CDAP32320 146 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 PITPNBP48739 271 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 LRRTM1Q86UE6 522 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 C19orf18Q8NEA5 215 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 DNAAF1Q8NEP3 725 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 OR14L1PQ8NHC6 308 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 ADAMTS17Q8TE56 1095 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 KCNJ15Q99712 375 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 EMC7Q9NPA0 242 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 SPATA2Q9UM82 520 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 EMC9Q9Y3B6 208 aa15.43■□□□□ 0.06
PCDHGC3-205ENST00000617641 PINLYPA6NC86 204 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 STMND1H3BQB6 276 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 DOK2O60496 412 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 NAT1P18440 290 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 CLDN12P56749 244 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 SPINK14Q6IE38 97 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 SLC25A47Q6Q0C1 308 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 ESPNLQ6ZVH7 1005 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 DEFB124Q8NES8 71 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 MCHR2Q969V1 340 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 SLC22A4Q9H015 551 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 LRFN1Q9P244 771 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 R4GMQ9 66 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 EIF1BO60739 113 aaKnown RBP15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 SLC43A1O75387 559 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 MAS1P04201 325 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 CD96P40200 585 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 CLDN20P56880 219 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 DCAF10Q5QP82 559 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 WACQ9BTA9 647 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 SRXN1Q9BYN0 137 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 CYB5R1Q9UHQ9 305 aa15.42■□□□□ 0.06
PCDHGC3-205ENST00000617641 RAF1P04049 648 aa15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 QDPRP09417 244 aa15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 CSNK2A1P68400 391 aaPredicted RBP15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 HIST3H3Q16695 136 aa15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 ZNF544Q6NX49 715 aa15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 JMJD6Q6NYC1 403 aaPredicted RBP15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 LRFN4Q6PJG9 635 aa15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 RNF133Q8WVZ7 376 aa15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 ABHD1Q96SE0 405 aa15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 ARPC5LQ9BPX5 153 aa15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 PCDHGA9Q9Y5G4 932 aaKnown RBP15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 CNTRLQ7Z7A1 2325 aa15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 OTOGLQ3ZCN5 2332 aa15.41■□□□□ 0.06
PCDHGC3-205ENST00000617641 TRAPPC6AO75865 159 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 H2BFMP0C1H6 154 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 ITGA3P26006 1051 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 ABHD17BQ5VST6 288 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 CREB3L2Q70SY1 520 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 GLRX5Q86SX6 157 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 SLAMF6Q96DU3 332 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 ZNF385AQ96PM9 386 aaKnown RBP15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 NAA11Q9BSU3 229 aaPredicted RBP15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 LIN7BQ9HAP6 207 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 LHFPL6Q9Y693 200 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 LANCL1O43813 399 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 ADRB1P08588 477 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 ENPP1P22413 925 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 WIPI1Q5MNZ9 446 aaPredicted RBP15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 STPG1Q5TH74 334 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 CFAP77Q6ZQR2 320 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 IL22RA1Q8N6P7 574 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 OR10S1Q8NGN2 331 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 SIGLEC12Q96PQ1 595 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 HDHD2Q9H0R4 259 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 MMP28Q9H239 520 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 G6PC2Q9NQR9 355 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 OR52A1Q9UKL2 312 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 POLR1DQ9Y2S0 133 aa15.4■□□□□ 0.06
PCDHGC3-205ENST00000617641 SPAARA0A1B0GVQ0 90 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms