RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 OR7E24Q6IFN5 339 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 PWWP2BQ6NUJ5 590 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 NSMAFQ92636 917 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 LMF2Q9BU23 707 aaKnown RBP13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 GPN1Q9HCN4 374 aaPredicted RBP13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 CENPMQ9NSP4 180 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 EPHA6Q9UF33 1036 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 CAMK2AQ9UQM7 478 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 EXOGQ9Y2C4 368 aaKnown RBP13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 KRT33AO76009 404 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 GIPP09681 153 aaPredicted RBP13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 GP1BBP13224 206 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 MAP3K8P41279 467 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 ACY1Q03154 408 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 CARD17Q5XLA6 110 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 GLDNQ6ZMI3 551 aaPredicted RBP13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 IL22RA1Q8N6P7 574 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 OR10AC1Q8NH08 325 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 IFI44Q8TCB0 444 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 SLC39A7Q92504 469 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 TIMP4Q99727 224 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 CMSS1Q9BQ75 279 aaKnown RBP13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 NOX4Q9NPH5 578 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 SLC22A11Q9NSA0 550 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 KLHDC2Q9Y2U9 406 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 IGKV1D-42A0A075B6H8 117 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 UBE2QL1A1L167 161 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 PYCARD-AS1I3L0S3 204 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 SLC16A7O60669 478 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 HLA-DOBP13765 273 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 H2BFSP57053 126 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 FAM209BQ5JX69 171 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 WBP2NLQ6ICG8 309 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 CDH26Q8IXH8 852 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 SEC61A2Q9H9S3 476 aa13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 NPDC1Q9NQX5 325 aaPredicted RBP13.06□□□□□ -0.32
SHROOM1-208ENST00000617339 LINC00587B1AMM8 73 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 PRR32B1ATL7 298 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 TGM6O95932 706 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 PVALBP20472 110 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 SIRPAP78324 504 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 EGR4Q05215 589 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 CORO6Q6QEF8 472 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 ZNF676Q8N7Q3 588 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 EXO5Q9H790 373 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 RXFP3Q9NSD7 469 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 LAMP5Q9UJQ1 280 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 ZNF337Q9Y3M9 751 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 A0A1B0GUH1 482 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 CELA2AP08217 269 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 KCNJ3P48549 501 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 ZNF574Q6ZN55 896 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 HSD17B13Q7Z5P4 300 aaPredicted RBP13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 LINC00346Q8IVM7 164 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 OR4K17Q8NGC6 315 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 STK35Q8TDR2 534 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 FCAMRQ8WWV6 532 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 KCNK15Q9H427 330 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 MED29Q9NX70 200 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 MUC6Q6W4X9 2439 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 BOD1L1Q8NFC6 3051 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 IFNGR1P15260 489 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 PPICP45877 212 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 HACD4Q5VWC8 232 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 SLC16A13Q7RTY0 426 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 NPEPL1Q8NDH3 523 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 ARL5BQ96KC2 179 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 DUSP23Q9BVJ7 150 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 EXOSC3Q9NQT5 275 aaKnown RBP13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 MED17Q9NVC6 651 aa13.05□□□□□ -0.32
SHROOM1-208ENST00000617339 DDAH2O95865 285 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 GUCA1AP43080 201 aaPredicted RBP13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 NANOS3P60323 173 aaKnown RBP13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 OR7A5Q15622 319 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 SWI5Q1ZZU3 235 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 KLHL26Q53HC5 615 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 LIPNQ5VXI9 398 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 LCN10Q6JVE6 187 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 TPRA1Q86W33 373 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 OR6V1Q8N148 313 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 CADM4Q8NFZ8 388 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 OR51A4Q8NGJ6 313 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 OR8S1Q8NH09 359 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 DOCK7Q96N67 2140 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 OCIAD1Q9NX40 245 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 KLHL9Q9P2J3 617 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 PRAF2O60831 178 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 GABRA4P48169 554 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 FGL1Q08830 312 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 DYRK1AQ13627 763 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 EBPQ15125 230 aaKnown RBP13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 C4orf46Q504U0 113 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 TMEM69Q5SWH9 247 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 UBALD2Q8IYN6 164 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 OR5M9Q8NGP3 310 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 AMELYQ99218 206 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 CHRNA9Q9UGM1 479 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 KCNG2Q9UJ96 466 aa13.04□□□□□ -0.32
SHROOM1-208ENST00000617339 LILRA5A6NI73 299 aa13.03□□□□□ -0.32
SHROOM1-208ENST00000617339 F5H5P2 479 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms