RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 NOX3Q9HBY0 568 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 CCNB1IP1Q9NPC3 277 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 CLN6Q9NWW5 311 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 POLR1DQ9Y2S0 133 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 LRRK2Q5S007 2527 aa13.63□□□□□ -0.23
PCDHGC3-204ENST00000617222 SLC22A31A6NKX4 558 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 C12orf71A8MTZ7 269 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 ZNF593O00488 134 aaPredicted RBP13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 SELENOFO60613 162 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 EPXP11678 715 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 CBR1P16152 277 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 ZNF32P17041 273 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 ZNF83P51522 516 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 PCBD1P61457 104 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 ADAM8P78325 824 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 GSG1Q2KHT4 349 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 LCN1P1Q5VSP4 162 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 MEDAGQ5VYS4 303 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 TMEM53Q6P2H8 277 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 DPPA2Q7Z7J5 298 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 ERI1Q8IV48 349 aaKnown RBP13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 FAM222BQ8WU58 562 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 APH1BQ8WW43 257 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 Q96MT0 163 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 SPOCK3Q9BQ16 436 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 ASH2LQ9UBL3 628 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 TIMM10BQ9Y5J6 103 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 COMMD3-BMI1R4GMX3 469 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 HSPE1-MOB4S4R3N1 261 aa13.62□□□□□ -0.23
PCDHGC3-204ENST00000617222 HCFC1P51610 2035 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 RAB36O95755 333 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 MMP7P09237 267 aaPredicted RBP13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 SPARCP09486 303 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 COL8A1P27658 744 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 HTR1FP30939 366 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 ARR3P36575 388 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 RPS27P42677 84 aaKnown RBP13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 ENTPD1P49961 510 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 PSG4Q00888 419 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 C1QTNF12Q5T7M4 302 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 CORO6Q6QEF8 472 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 SEZ6L2Q6UXD5 910 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 SSX8Q7RTT4 187 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 THAP5Q7Z6K1 395 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 SYT9Q86SS6 491 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 LINC00346Q8IVM7 164 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 TIGD4Q8IY51 512 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 OR6N2Q8NGY6 317 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 OR2AJ1Q8NGZ0 328 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 CNIH3Q8TBE1 160 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 RFKQ969G6 155 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 INTS14Q96SY0 518 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 ZNF184Q99676 751 aaPredicted RBP13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 MARCH7Q9H992 704 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 NPAP1Q9NZP6 1156 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 WARS2Q9UGM6 360 aaKnown RBP13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 KCNG2Q9UJ96 466 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 RAB26Q9ULW5 256 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 LHFPL6Q9Y693 200 aa13.61□□□□□ -0.23
PCDHGC3-204ENST00000617222 M0R1B8 84 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 TMCC2O75069 709 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 WBP4O75554 376 aaKnown RBP13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 MRPL3P09001 348 aaKnown RBP13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 PSKH1P11801 424 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 PAX7P23759 505 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 NAA10P41227 235 aaPredicted RBP13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 IDH3GP51553 393 aaPredicted RBP13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 NUDT6P53370 316 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 CDK5R2Q13319 367 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 AQP6Q13520 282 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 RAB39AQ14964 217 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 PABPC1L2AQ5JQF8 200 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 TEX30Q5JUR7 227 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 SLC18B1Q6NT16 456 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 TMEM154Q6P9G4 183 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 AKR7LQ8NHP1 331 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 SMAP2Q8WU79 429 aaPredicted RBP13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 WACQ9BTA9 647 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 OR2H1Q9GZK4 316 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 WNT5BQ9H1J7 359 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 AMBNQ9NP70 447 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 NGBQ9NPG2 151 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 HAO2Q9NYQ3 351 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 CRNNQ9UBG3 495 aaPredicted RBP13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 PLEKHB1Q9UF11 243 aaPredicted RBP13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 CYB5R1Q9UHQ9 305 aa13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 GDF2Q9UK05 429 aaPredicted RBP13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.6□□□□□ -0.23
PCDHGC3-204ENST00000617222 PRR14LQ5THK1 2151 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 ICE1Q9Y2F5 2266 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 SNTNA6NMZ2 147 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 RER1O15258 196 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 CELA3BP08861 270 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 COX6B1P14854 86 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 CRYGSP22914 178 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 HCCSP53701 268 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 PLP2Q04941 152 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 SCRN3Q0VDG4 424 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 TMED1Q13445 227 aa13.59□□□□□ -0.23
PCDHGC3-204ENST00000617222 GGTLC2Q14390 218 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms