RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 PLBD1Q6P4A8 553 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 CPOQ8IVL8 374 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 GABRG1Q8N1C3 465 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 PROKR2Q8NFJ6 384 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 OR9Q1Q8NGQ5 310 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 PITX2Q99697 317 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 NUAK2Q9H093 628 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 ESRP2Q9H6T0 727 aaKnown RBP12.97□□□□□ -0.33
UBXN1-218ENST00000616865 SEC61A2Q9H9S3 476 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 TAS2R16Q9NYV7 291 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 NDRG4Q9ULP0 352 aaKnown RBP12.97□□□□□ -0.33
UBXN1-218ENST00000616865 PRR14LQ5THK1 2151 aa12.97□□□□□ -0.33
UBXN1-218ENST00000616865 OR6C68A6NDL8 312 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 M0R129 80 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 PRKYO43930 277 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 MPZL2O60487 215 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 LYZL6O75951 148 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 HLA-DQA2P01906 255 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 CD3EP07766 207 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 SLC25A1P53007 311 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 RPS7P62081 194 aaKnown RBP12.96□□□□□ -0.33
UBXN1-218ENST00000616865 ADARB1P78563 741 aaKnown RBP12.96□□□□□ -0.33
UBXN1-218ENST00000616865 ARF1P84077 181 aaKnown RBP12.96□□□□□ -0.33
UBXN1-218ENST00000616865 TSC22D1Q15714 1073 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 TAB1Q15750 504 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 SGCAQ16586 387 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 KLHL12Q53G59 568 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 C6orf52Q5T4I8 152 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 LRFN4Q6PJG9 635 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 SLC25A47Q6Q0C1 308 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 BHLHA15Q7RTS1 189 aaPredicted RBP12.96□□□□□ -0.33
UBXN1-218ENST00000616865 OR8J1Q8NGP2 316 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 TMEM163Q8TC26 289 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 SMAP2Q8WU79 429 aaPredicted RBP12.96□□□□□ -0.33
UBXN1-218ENST00000616865 TRUB1Q8WWH5 349 aaKnown RBP12.96□□□□□ -0.33
UBXN1-218ENST00000616865 NANOS1Q8WY41 292 aaKnown RBP12.96□□□□□ -0.33
UBXN1-218ENST00000616865 NEUROG1Q92886 237 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 KISS1RQ969F8 398 aaPredicted RBP12.96□□□□□ -0.33
UBXN1-218ENST00000616865 TSSK2Q96PF2 358 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 HDHD5Q9BXW7 423 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 OR51V1Q9H2C8 321 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 Q9H521 79 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 MED20Q9H944 212 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 NGBQ9NPG2 151 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 CLN6Q9NWW5 311 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 FKBP7Q9Y680 259 aa12.96□□□□□ -0.33
UBXN1-218ENST00000616865 MXRA5Q9NR99 2828 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 RNF212BA8MTL3 300 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 ZNF99A8MXY4 864 aaPredicted RBP12.95□□□□□ -0.34
UBXN1-218ENST00000616865 RPL36A-HNRNPH2H7BZ11 118 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 CD5LO43866 347 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 IGHV4-39P01824 125 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 CTLA4P16410 223 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 IGHV1-2P23083 117 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 PYCR1P32322 319 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 IL18R1Q13478 541 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 STK11Q15831 433 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 ZNF362Q5T0B9 420 aaPredicted RBP12.95□□□□□ -0.34
UBXN1-218ENST00000616865 C10orf128Q5T292 105 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 SFRP5Q5T4F7 317 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 KLHL24Q6TFL4 600 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 SEZ6L2Q6UXD5 910 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 ZNF813Q6ZN06 617 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 DNM1P46Q6ZS02 220 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 LINGO2Q7L985 606 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 GID4Q8IVV7 300 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 GLB1L2Q8IW92 636 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 PHC2Q8IXK0 858 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 C8orf59Q8N0T1 100 aaPredicted RBP12.95□□□□□ -0.34
UBXN1-218ENST00000616865 KBTBD8Q8NFY9 601 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 OR10H5Q8NGA6 315 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 OR6K6Q8NGW6 343 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 ZNF184Q99676 751 aaPredicted RBP12.95□□□□□ -0.34
UBXN1-218ENST00000616865 FOXB1Q99853 325 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 KCNN2Q9H2S1 579 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 HINT3Q9NQE9 182 aaKnown RBP12.95□□□□□ -0.34
UBXN1-218ENST00000616865 B9D1Q9UPM9 204 aa12.95□□□□□ -0.34
UBXN1-218ENST00000616865 COA3Q9Y2R0 106 aaPredicted RBP12.95□□□□□ -0.34
UBXN1-218ENST00000616865 SONP18583 2426 aaKnown RBP12.95□□□□□ -0.34
UBXN1-218ENST00000616865 SNTNA6NMZ2 147 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 RAD51DO75771 328 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 SEC14L2O76054 403 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 FARS2O95363 451 aaKnown RBP12.94□□□□□ -0.34
UBXN1-218ENST00000616865 GYPBP06028 91 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 ITGA5P08648 1049 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 SPI1P17947 270 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 NPR2P20594 1047 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 LAP3P28838 519 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 FMO3P31513 532 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 ZNF133P52736 654 aaPredicted RBP12.94□□□□□ -0.34
UBXN1-218ENST00000616865 GLO1Q04760 184 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 APOFQ13790 326 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 ZNF672Q499Z4 452 aaPredicted RBP12.94□□□□□ -0.34
UBXN1-218ENST00000616865 LCN1P1Q5VSP4 162 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 ZNF691Q5VV52 312 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 OR7E24Q6IFN5 339 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 ANKRD16Q6P6B7 361 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.94□□□□□ -0.34
UBXN1-218ENST00000616865 OR6V1Q8N148 313 aa12.94□□□□□ -0.34
UBXN1-218ENST00000616865 ZNF433Q8N7K0 673 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms