RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 TRAPPC6AO75865 159 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 POLR2HP52434 150 aaKnown RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC25A1P53007 311 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 SMCO1Q147U7 214 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 EMC4Q5J8M3 183 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 PTCRAQ6ISU1 281 aaPredicted RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 ACBD4Q8NC06 268 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR1J4Q8NGS1 313 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 C17orf50Q8WW18 174 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 SPACA5Q96QH8 159 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLCO5A1Q9H2Y9 848 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 EMC7Q9NPA0 242 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF701Q9NV72 531 aaPredicted RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR5V1Q9UGF6 321 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 LOC285556D6RIA3 1793 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 TDRD15B5MCY1 1934 aaKnown RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 OGG1O15527 345 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 NUDT21O43809 227 aaKnown RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 ALOX12BO75342 701 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 RGS11O94810 467 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 IGHG1P01857 330 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 HLA-AP01891 365 aaKnown RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 CXCL3P19876 107 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 P2RX1P51575 399 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC26A5P58743 744 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 DEFA5Q01523 94 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF117Q03924 483 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 NKAPLQ5M9Q1 402 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 GPR119Q8TDV5 335 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF426Q9BUY5 554 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 GHITMQ9H3K2 345 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 TMEM74BQ9NUR3 256 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLCO1C1Q9NYB5 712 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 TAS2R3Q9NYW6 316 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 TEX46H3BTG2 121 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 P2RY10O00398 339 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 CALCBP10092 127 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 AKR1C4P17516 323 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 TMEM164Q5U3C3 297 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 NPSR1Q6W5P4 371 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 ATG4DQ86TL0 474 aaPredicted RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR52N5Q8NH56 324 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 NKX3-1Q99801 234 aaPredicted RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 PRRT1Q99946 306 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 UBE2ZQ9H832 354 aaPredicted RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 CHMP1AQ9HD42 196 aaPredicted RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 MRM2Q9UI43 246 aaKnown RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 A0A1W2PNR3 127 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 M0QYG6 137 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 IFNA21P01568 189 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 WNT1P04628 370 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 DPP4P27487 766 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 SLC37A1P57057 533 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 SWI5Q1ZZU3 235 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 ST8SIA1Q92185 356 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 EDAQ92838 391 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZBTB8AQ96BR9 441 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 SCGB3A2Q96PL1 93 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 VSX1Q9NZR4 365 aaPredicted RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 OR52A1Q9UKL2 312 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 NPIPA2E9PIF3 369 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 NPIPA3F8WFD2 350 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 H7C417 338 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 CHRM2P08172 466 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 GLB1P16278 677 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 ANXA7P20073 488 aaKnown RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZNF93P35789 620 aaPredicted RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 NANOS3P60323 173 aaKnown RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 IFITM2Q01629 132 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 DOC2BQ14184 412 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 WDR38Q5JTN6 314 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 LCN10Q6JVE6 187 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 RHOUQ7L0Q8 258 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 MISPQ8IVT2 679 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 KCNG3Q8TAE7 436 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 NUDCD2Q8WVJ2 157 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 KISS1RQ969F8 398 aaPredicted RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 FGGYQ96C11 551 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 ZC3HAV1LQ96H79 300 aaKnown RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 ULBP2Q9BZM5 246 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 METTL8Q9H825 291 aaKnown RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 MTFP1Q9UDX5 166 aa5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 PTRH2Q9Y3E5 179 aaKnown RBP5.1□□□□□ -1.59
SYNCRIP-204ENST00000616122 A0A0A6YYJ9 748 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 NPIPB9F8W1W9 429 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 WRBO00258 174 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 HTR3BO95264 441 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 IGKV1D-16P01601 117 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 HRGP04196 525 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 ABCD3P28288 659 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 S100A11P31949 105 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 DCDP81605 110 aaKnown RBP5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 SORDQ00796 357 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 TOMM34Q15785 309 aaPredicted RBP5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 BCL2A1Q16548 175 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 LPAL2Q16609 132 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 C2orf76Q3KRA6 126 aa5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 DND1Q8IYX4 353 aaKnown RBP5.09□□□□□ -1.59
SYNCRIP-204ENST00000616122 SMRP1Q8NCR6 262 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms