RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 OR1J4Q8NGS1 313 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 OR2G2Q8NGZ5 317 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 OR14C36Q8NHC7 312 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 GPR148Q8TDV2 347 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 LURAP1Q96LR2 239 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 ATG101Q9BSB4 218 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 ELOVL3Q9HB03 270 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 UPB1Q9UBR1 384 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 RNF222A6NCQ9 220 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 C17orf51A8MQB3 221 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 MPTX1A8MV57 137 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 CDC40O60508 579 aaKnown RBP eCLIP11.92□□□□□ -0.5
MSH6-214ENST00000616033 AGR2O95994 175 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 WNT11O96014 354 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 GNRH1P01148 92 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 S100PP25815 95 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 CD80P33681 288 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 MNX1P50219 401 aaPredicted RBP11.92□□□□□ -0.5
MSH6-214ENST00000616033 CEBPGP53567 150 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 ITPRIPL2Q3MIP1 535 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 TAF8Q7Z7C8 310 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 OR4C3Q8NH37 302 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 GLYATL2Q8WU03 294 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 CYYR1Q96J86 154 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 SPACA5Q96QH8 159 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 DTX4Q9Y2E6 619 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 ADH1AP07327 375 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 CEBPBP17676 345 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 SEC13P55735 322 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 ILF3Q12906 894 aaKnown RBP eCLIP11.92□□□□□ -0.51e-6■■■□□ 16.2
MSH6-214ENST00000616033 ENPP2Q13822 863 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 TMEM31Q5JXX7 168 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 UNQ9370/PRO34162Q6UXP9 181 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 TTLL10Q6ZVT0 673 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 RTN4RL2Q86UN3 420 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 SFTPA2Q8IWL1 248 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 CSNK1A1LQ8N752 337 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 CDRT4Q8N9R6 151 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 PATE1Q8WXA2 126 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 ARL11Q969Q4 196 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 BARX1Q9HBU1 254 aaPredicted RBP11.92□□□□□ -0.5
MSH6-214ENST00000616033 TAS2R8Q9NYW2 309 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 GRHPRQ9UBQ7 328 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 DNAJB11Q9UBS4 358 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 ENTPD2Q9Y5L3 495 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 M0R036 132 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 PMS2P2O95744 297 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 ITGA3P26006 1051 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 MAPK3P27361 379 aaPredicted RBP11.91□□□□□ -0.5
MSH6-214ENST00000616033 CALCRP30988 508 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 GNALP38405 381 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 VITQ6UXI7 678 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 ACOT7LQ6ZUV0 252 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 ZNF584Q8IVC4 421 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 KDM8Q8N371 416 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 KCNRGQ8N5I3 272 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 FRMD1Q8N878 549 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 ADAD2Q8NCV1 583 aaKnown RBP11.91□□□□□ -0.5
MSH6-214ENST00000616033 HAO2Q9NYQ3 351 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 TBX21Q9UL17 535 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 DAPP1Q9UN19 280 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 FANCMQ8IYD8 2048 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 GLCEO94923 617 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 ERCC1P07992 297 aaPredicted RBP11.91□□□□□ -0.5
MSH6-214ENST00000616033 THBS1P07996 1170 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 CHAF1BQ13112 559 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 ALG10Q5BKT4 473 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 RNASE10Q5GAN6 216 aaKnown RBP11.91□□□□□ -0.5
MSH6-214ENST00000616033 EEF1A1P5Q5VTE0 462 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 ANKRD16Q6P6B7 361 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 CLEC9AQ6UXN8 241 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 FAM122BQ7Z309 247 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 ANKRD33Q7Z3H0 272 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 EID2Q8N6I1 236 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 SLC2A12Q8TD20 617 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 TSACCQ96A04 125 aaPredicted RBP11.91□□□□□ -0.5
MSH6-214ENST00000616033 SFXN1Q9H9B4 322 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 ZFP57Q9NU63 452 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 TAS2R4Q9NYW5 299 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 TNFSF18Q9UNG2 199 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 PLXNA2O75051 1894 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 TRIOO75962 3097 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 RDH16O75452 317 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 IGKV1D-16P01601 117 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 CXCL10P02778 98 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 IFNA6P05013 189 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 CPT2P23786 658 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 SDHAP31040 664 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 PNLIPRP2P54317 469 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 TAS2R19P59542 299 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 WDR38Q5JTN6 314 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 CLEC1AQ8NC01 280 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 OR2L8Q8NGY9 312 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 FOXRED1Q96CU9 486 aaPredicted RBP11.91□□□□□ -0.5
MSH6-214ENST00000616033 TRIM2Q9C040 744 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 PHPT1Q9NRX4 125 aaPredicted RBP11.91□□□□□ -0.5
MSH6-214ENST00000616033 VSIG4Q9Y279 399 aa11.91□□□□□ -0.5
MSH6-214ENST00000616033 TICRRQ7Z2Z1 1910 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 H0Y8X5 98 aa11.9□□□□□ -0.5
MSH6-214ENST00000616033 ADAP1O75689 374 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms