RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 PYCARD-AS1I3L0S3 204 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 PRPH2P23942 346 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 SSX1Q16384 188 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 ST3GAL2Q16842 350 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 KIAA1958Q8N8K9 716 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 LCORQ96JN0 433 aaPredicted RBP17.25■□□□□ 0.35
SPAST-203ENST00000615843 TOLLIPQ9H0E2 274 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 ENKD1Q9H0I2 346 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 ACAD8Q9UKU7 415 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 TRAPPC2LQ9UL33 140 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 A0A1W2PR48 441 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 DSCR3O14972 297 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 AQP8O94778 261 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 CBX7O95931 251 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 OTX2P32243 289 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 MS4A6EQ96DS6 147 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 ZNF75AQ96N20 296 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.25■□□□□ 0.35
SPAST-203ENST00000615843 ETHE1O95571 254 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 IGLV3-25P01717 112 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 APOA2P02652 100 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 FABP1P07148 127 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 SLC16A14Q7RTX9 510 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 TMPRSS7Q7RTY8 843 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 OR14A16Q8NHC5 309 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 DLL4Q9NR61 685 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 DNAJB11Q9UBS4 358 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 FTSJ1Q9UET6 329 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 PADI1Q9ULC6 663 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 SRPK3Q9UPE1 567 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 PLCH1Q4KWH8 1693 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 CYB5BO43169 146 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 FCMRO60667 390 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.24■□□□□ 0.35
SPAST-203ENST00000615843 FAM71CQ8NEG0 241 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 TMEM123Q8N131 208 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 ORAI1Q96D31 301 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 MARVELD1Q9BSK0 173 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 CACNA1SQ13698 1873 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 RPL27P61353 136 aaKnown RBP17.24■□□□□ 0.35
SPAST-203ENST00000615843 H3F3AP84243 136 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 FBXW5Q969U6 566 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 GNPNAT1Q96EK6 184 aaPredicted RBP17.24■□□□□ 0.35
SPAST-203ENST00000615843 MRPL22Q9NWU5 206 aaKnown RBP17.24■□□□□ 0.35
SPAST-203ENST00000615843 A8MVM7 634 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 CTSLP07711 333 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 BAMBIQ13145 260 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 DUSP8Q13202 625 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 HLXQ14774 488 aaPredicted RBP17.24■□□□□ 0.35
SPAST-203ENST00000615843 C4orf17Q53FE4 359 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 FAM185AQ8N0U4 392 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 NUDCD2Q8WVJ2 157 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 TPSD1Q9BZJ3 242 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 STRADBQ9C0K7 418 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 PLEKHA2Q9HB19 425 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 C19orf53Q9UNZ5 99 aaPredicted RBP17.24■□□□□ 0.35
SPAST-203ENST00000615843 MT-ATP6P00846 226 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 ELLP55199 621 aaPredicted RBP17.24■□□□□ 0.35
SPAST-203ENST00000615843 MISPQ8IVT2 679 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 SKA3Q8IX90 412 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 BPIFCQ8NFQ6 507 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 CPT1CQ8TCG5 803 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 PLAC1Q9HBJ0 212 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 TM7SF3Q9NS93 570 aa17.24■□□□□ 0.35
SPAST-203ENST00000615843 OR6C68A6NDL8 312 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 AKR1C3P42330 323 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 MRPL38Q96DV4 380 aaKnown RBP17.23■□□□□ 0.35
SPAST-203ENST00000615843 TLE1Q04724 770 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 GPNMBQ14956 572 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 DEFB133Q30KQ1 61 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 ASH2LQ9UBL3 628 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 ADRA2CP18825 462 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 AARDQ4LEZ3 155 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 MSRB3Q8IXL7 192 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 C19orf47Q8N9M1 422 aaKnown RBP17.23■□□□□ 0.35
SPAST-203ENST00000615843 DMBX1Q8NFW5 382 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 ZNF2Q9BSG1 426 aaPredicted RBP17.23■□□□□ 0.35
SPAST-203ENST00000615843 TUSC2O75896 110 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 ZFAND5O76080 213 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 SDHAP31040 664 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 OR2T2Q6IF00 324 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 C11orf87Q6NUJ2 197 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 IL34Q6ZMJ4 242 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 SIRT6Q8N6T7 355 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 MARCH1Q8TCQ1 289 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 PLA2G12AQ9BZM1 189 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 MED9Q9NWA0 146 aa17.23■□□□□ 0.35
SPAST-203ENST00000615843 PHOX2AO14813 284 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 PDGFBP01127 241 aaPredicted RBP17.22■□□□□ 0.35
SPAST-203ENST00000615843 SLC2A1P11166 492 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 PI3P19957 117 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 ACKR3P25106 362 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 RAG2P55895 527 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 FOXK1P85037 733 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 RAB30Q15771 203 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 C1orf140Q5VVS0 124 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 LINC01465Q8N7H1 131 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 C2orf50Q96LR7 162 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 CABLES2Q9BTV7 478 aa17.22■□□□□ 0.35
SPAST-203ENST00000615843 LEUTXA8MZ59 168 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms