RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 PYDC1Q8WXC3 89 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 UBE2FQ969M7 185 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 DDOQ99489 341 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 GSX2Q9BZM3 304 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 OR2J1Q9GZK6 312 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 OR10A4Q9H209 315 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 C1orf21Q9H246 121 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 MSL2Q9HCI7 577 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 POLE4Q9NR33 117 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 CBLN4Q9NTU7 201 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 LHFPL6Q9Y693 200 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 STAB1Q9NY15 2570 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 IGLV1-36A0A0B4J1U3 117 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 DHRS12A0PJE2 317 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 PSMD9O00233 223 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 GMNNO75496 209 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 DNAJC8O75937 253 aaPredicted RBP4.89□□□□□ -1.63
CPNE3-208ENST00000614678 ZNF205O95201 554 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 SERPINA5P05154 406 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 INHBBP09529 407 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 SLC2A1P11166 492 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 SDHAP31040 664 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 APOBEC3AP31941 199 aaPredicted RBP4.89□□□□□ -1.63
CPNE3-208ENST00000614678 CCL8P80075 99 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 DAG1Q14118 895 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 CRMP1Q14194 572 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 C20orf204Q6ZNR8 217 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 PIWIL3Q7Z3Z3 882 aaKnown RBP4.89□□□□□ -1.63
CPNE3-208ENST00000614678 CYP4Z1Q86W10 505 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 RFLNBQ8N5W9 214 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 LRTOMTQ8WZ04 291 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 DVL3Q92997 716 aaPredicted RBP4.89□□□□□ -1.63
CPNE3-208ENST00000614678 PIGTQ969N2 578 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 POM121L2Q96KW2 1035 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 OR2H1Q9GZK4 316 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 VSX1Q9NZR4 365 aaPredicted RBP4.89□□□□□ -1.63
CPNE3-208ENST00000614678 PDP1Q9P0J1 537 aaPredicted RBP4.89□□□□□ -1.63
CPNE3-208ENST00000614678 N6AMT1Q9Y5N5 214 aa4.89□□□□□ -1.63
CPNE3-208ENST00000614678 FKBP6O75344 327 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 STOMP27105 288 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 DAP3P51398 398 aaKnown RBP4.88□□□□□ -1.63
CPNE3-208ENST00000614678 HMGA2P52926 109 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 CCDC92Q53HC0 331 aaPredicted RBP4.88□□□□□ -1.63
CPNE3-208ENST00000614678 DNM1P46Q6ZS02 220 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 RNF113BQ8IZP6 322 aaKnown RBP4.88□□□□□ -1.63
CPNE3-208ENST00000614678 MCUR1Q96AQ8 359 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 OTULINQ96BN8 352 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 BOD1Q96IK1 185 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 C18orf12Q96KH6 178 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 DOK1Q99704 481 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 NGBQ9NPG2 151 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 IGHV4-61A0A0C4DH41 118 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 TCRBV3S1A0A5B6 114 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 PRR32B1ATL7 298 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 RAB36O95755 333 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 IGHMP01871 453 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 LCKP06239 509 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 GAAP10253 952 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 FPR3P25089 353 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 ZNF133P52736 654 aaPredicted RBP4.88□□□□□ -1.63
CPNE3-208ENST00000614678 CHRNB3Q05901 458 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 RAB35Q15286 201 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 MICAQ29983 383 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 ABHD12BQ7Z5M8 362 aaPredicted RBP4.88□□□□□ -1.63
CPNE3-208ENST00000614678 FBXL14Q8N1E6 418 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 LNX2Q8N448 690 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 BHLHE23Q8NDY6 225 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 OR10G2Q8NGC3 310 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 IPCEF1Q8WWN9 437 aaPredicted RBP4.88□□□□□ -1.63
CPNE3-208ENST00000614678 PTP4A1Q93096 173 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 MAP6Q96JE9 813 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 ADAD1Q96M93 576 aaKnown RBP4.88□□□□□ -1.63
CPNE3-208ENST00000614678 TSSK6Q9BXA6 273 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 BPESC1Q9GZL8 116 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 SIAEQ9HAT2 523 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 BEX4Q9NWD9 120 aaPredicted RBP4.88□□□□□ -1.63
CPNE3-208ENST00000614678 B9D1Q9UPM9 204 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 CCNB2O95067 398 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 HOXB4P17483 251 aaPredicted RBP4.88□□□□□ -1.63
CPNE3-208ENST00000614678 ARR3P36575 388 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 DAPP51397 102 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 NUDT6P53370 316 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 MRPS34P82930 218 aaKnown RBP4.88□□□□□ -1.63
CPNE3-208ENST00000614678 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.88□□□□□ -1.63
CPNE3-208ENST00000614678 ASRGL1Q7L266 308 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 VASH1Q7L8A9 365 aaPredicted RBP4.88□□□□□ -1.63
CPNE3-208ENST00000614678 OR5AS1Q8N127 324 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 C19orf18Q8NEA5 215 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 YIPF5Q969M3 257 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 COX4I2Q96KJ9 171 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 CXorf56Q9H5V9 222 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 AP3M1Q9Y2T2 418 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 STARD10Q9Y365 291 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 GRIP1Q9Y3R0 1128 aa4.88□□□□□ -1.63
CPNE3-208ENST00000614678 H0YL77 283 aa4.87□□□□□ -1.63
CPNE3-208ENST00000614678 APOL3O95236 402 aa4.87□□□□□ -1.63
CPNE3-208ENST00000614678 RAP2AP10114 183 aa4.87□□□□□ -1.63
CPNE3-208ENST00000614678 GGT2P36268 569 aa4.87□□□□□ -1.63
CPNE3-208ENST00000614678 UCP2P55851 309 aa4.87□□□□□ -1.63
CPNE3-208ENST00000614678 GALK2Q01415 458 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms