RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 MISPQ8IVT2 679 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 OR4A16Q8NH70 328 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 B4GALT6Q9UBX8 382 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 GPR160Q9UJ42 338 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 OSGIN2Q9Y236 505 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 DNPH1O43598 174 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 LMO2P25791 158 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 WASP42768 502 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 PIGPP57054 158 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 SPCS3P61009 180 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 OR5I1Q13606 314 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 SAPCD1Q5SSQ6 148 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 OR13C5Q8NGS8 318 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 SLC23A2Q9UGH3 650 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 FREM3P0C091 2139 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 PHF1O43189 567 aaPredicted RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 CBX7O95931 251 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 IGFBP4P22692 258 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 DGCR2P98153 550 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ARL16Q0P5N6 197 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ZNF273Q14593 569 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 UBE2V2Q15819 145 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 GSG1Q2KHT4 349 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 PIP5KL1Q5T9C9 394 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 EIF4E3Q8N5X7 224 aaKnown RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 SLC35G3Q8N808 338 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 OR5M9Q8NGP3 310 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 MCHR2Q969V1 340 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 PLSCR3Q9NRY6 295 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ARFGEF1Q9Y6D6 1849 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ZNF407Q9C0G0 2248 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 TRAPPC2LH3BP13 241 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 PGA3P0DJD8 388 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ZNF8P17098 575 aaPredicted RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 NAAAQ02083 359 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ECH1Q13011 328 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 ZNF626Q68DY1 528 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 TMEM182Q6ZP80 229 aaPredicted RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 DEFB128Q7Z7B8 93 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 OLIG1Q8TAK6 271 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 KCNQ2O43526 872 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 HRO43593 1189 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 LGALSLQ3ZCW2 172 aaPredicted RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 C9orf152Q5JTZ5 239 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 OR4N5Q8IXE1 308 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ZNF383Q8NA42 475 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 KMT2EQ8IZD2 1858 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 NOTCH3Q9UM47 2321 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ZNF320A2RRD8 509 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 CD82P27701 267 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 GPR12P47775 334 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 PSMG4Q5JS54 123 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 TFAP2EQ6VUC0 442 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 SLC16A13Q7RTY0 426 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 MRPL52Q86TS9 123 aaKnown RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 OR4C16Q8NGL9 310 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 PCNPQ8WW12 178 aaKnown RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 ZNF845Q96IR2 970 aaPredicted RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 JSRP1Q96MG2 331 aaPredicted RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 RSG1Q9BU20 258 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 FZD9O00144 591 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 GLCEO94923 617 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 SCGB1C2P0DMR2 95 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 OR1Q1Q15612 314 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 RPEL1Q2QD12 228 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ERASQ7Z444 233 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 SEC22AQ96IW7 307 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 TMEM238LA0A1B0GVL6 79 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 A6NJY4 79 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 RRP8O43159 456 aaKnown RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 RNGTTO60942 597 aaKnown RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 TNFP01375 233 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 RAC1P63000 192 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ANGPTL5Q86XS5 388 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 GPR78Q96P69 363 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 SERPINE3A8MV23 424 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 CDK2AP1O14519 115 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 IRF2P14316 349 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ITGB7P26010 798 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 NRLP54845 237 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ZNF776Q68DI1 518 aaPredicted RBP8.08□□□□□ -1.12
TTC28-208ENST00000612946 MKXQ8IYA7 352 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 OR10P1Q8NGE3 313 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 NAT8Q9UHE5 227 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ANKRD30BLA7E2S9 258 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 GLAP06280 429 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 TMEM241Q24JQ0 296 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 CERKQ8TCT0 537 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 SGCZQ96LD1 299 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 AMBRA1Q9C0C7 1298 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 MCRIP1C9JLW8 97 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 NRASP01111 189 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 HRASP01112 189 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 KRASP01116 189 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 G6PCP35575 357 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 SLC6A11P48066 632 aa8.07□□□□□ -1.12
TTC28-208ENST00000612946 MEF2AQ02078 507 aaPredicted RBP8.07□□□□□ -1.12
TTC28-208ENST00000612946 SURF2Q15527 256 aaPredicted RBP8.07□□□□□ -1.12
TTC28-208ENST00000612946 ZNF528Q3MIS6 628 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms