RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ASH1LQ9NR48 2969 aaKnown RBP7.82□□□□□ -1.16
SMAD4-217ENST00000611848 UTP20O75691 2785 aaKnown RBP7.82□□□□□ -1.16
SMAD4-217ENST00000611848 IGKV1D-42A0A075B6H8 117 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 IGKV3D-15A0A087WSY6 115 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 TRAV27A0A087WT01 109 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 RIIAD1A6NNX1 92 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 C12orf71A8MTZ7 269 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 GPR171O14626 319 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 TBX1O43435 398 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 VAMP5O95183 116 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 PPP1R3DO95685 299 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 CGAP01215 116 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 HLA-DPB1P04440 258 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF16P17020 682 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-217ENST00000611848 PAICSP22234 425 aaKnown RBP7.81□□□□□ -1.16
SMAD4-217ENST00000611848 GRNP28799 593 aaKnown RBP7.81□□□□□ -1.16
SMAD4-217ENST00000611848 ATP6V1E1P36543 226 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 RANBP1P43487 201 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 RPS5P46782 204 aaKnown RBP7.81□□□□□ -1.16
SMAD4-217ENST00000611848 SLC16A1P53985 500 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 GALEQ14376 348 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 SPANXN2Q5MJ10 180 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 STEAP3Q658P3 488 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 BRICD5Q6PL45 260 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 TMPRSS11AQ6ZMR5 421 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 LSRQ86X29 649 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-217ENST00000611848 ACBD4Q8NC06 268 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 OR51G2Q8NGK0 314 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 SPRYD4Q8WW59 207 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-217ENST00000611848 SGTBQ96EQ0 304 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 SDHCQ99643 169 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-217ENST00000611848 SPOCK3Q9BQ16 436 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 NEURL2Q9BR09 285 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 CCDC32Q9BV29 185 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 PTDSS2Q9BVG9 487 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 SF3B5Q9BWJ5 86 aaKnown RBP7.81□□□□□ -1.16
SMAD4-217ENST00000611848 RBM24Q9BX46 236 aaKnown RBP7.81□□□□□ -1.16
SMAD4-217ENST00000611848 FANCFQ9NPI8 374 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 ABCB10Q9NRK6 738 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 BABAM2Q9NXR7 383 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 EMC3Q9P0I2 261 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 ING1Q9UK53 422 aaPredicted RBP7.81□□□□□ -1.16
SMAD4-217ENST00000611848 GSTK1Q9Y2Q3 226 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 ABCA4P78363 2273 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 AQP7P3A6NL99 342 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF716A6NP11 495 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 FTCDNL1E5RQL4 147 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 C19orf84I3L1E1 186 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 AKR7A3O95154 331 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 PTTG1O95997 202 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 IFNGP01579 166 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 HNRNPCP07910 306 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF3P17036 446 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 IGFBP2P18065 325 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 CD53P19397 219 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 KLK2P20151 261 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 RUNX1T1Q06455 604 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 POU4F2Q12837 409 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 CRMP1Q14194 572 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 TMEM225Q6GV28 225 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 LUZP2Q86TE4 346 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 TMEM99Q8N816 258 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 LIPHQ8WWY8 451 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 TAAR8Q969N4 342 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 OTULINQ96BN8 352 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 SLC25A36Q96CQ1 311 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 KATNB1Q9BVA0 655 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 ISG20L2Q9H9L3 353 aaKnown RBP7.81□□□□□ -1.16
SMAD4-217ENST00000611848 ADGRL4Q9HBW9 690 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 ELOVL5Q9NYP7 299 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 KLHL21Q9UJP4 597 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 RASD1Q9Y272 281 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 B3GALT5Q9Y2C3 310 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 CMAHPQ9Y471 501 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 V9GYH0 126 aa7.81□□□□□ -1.16
SMAD4-217ENST00000611848 CENPEQ02224 2701 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 DAPL1A0PJW8 107 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 ZNF814B7Z6K7 855 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 GABRPO00591 440 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 RAMP1O60894 148 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 OR7A10O76100 309 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 NDUFB2O95178 105 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 MT-ATP6P00846 226 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 SBK2P0C263 348 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 CLEC2LP0C7M8 214 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 CELP19835 753 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 COL8A1P27658 744 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 NOS3P29474 1203 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 GRPRP30550 384 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 UQCRC1P31930 480 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 SDC2P34741 201 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 CAPZA2P47755 286 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 P2RY4P51582 365 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 RPS4XP62701 263 aaKnown RBP7.8□□□□□ -1.16
SMAD4-217ENST00000611848 SORDQ00796 357 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 HNRNPA0Q13151 305 aaKnown RBP7.8□□□□□ -1.16
SMAD4-217ENST00000611848 KRR1Q13601 381 aaKnown RBP7.8□□□□□ -1.16
SMAD4-217ENST00000611848 GGTLC2Q14390 218 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 SLC17A1Q14916 467 aa7.8□□□□□ -1.16
SMAD4-217ENST00000611848 POU4F3Q15319 338 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms