RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 SLC25A44Q96H78 314 aaPredicted RBP15.46■□□□□ 0.07
NEK3-206ENST00000611833 GAL3ST1Q99999 423 aa15.46■□□□□ 0.07
NEK3-206ENST00000611833 UBE2ZQ9H832 354 aaPredicted RBP15.46■□□□□ 0.07
NEK3-206ENST00000611833 EMC9Q9Y3B6 208 aa15.46■□□□□ 0.07
NEK3-206ENST00000611833 AUP1Q9Y679 476 aa15.46■□□□□ 0.07
NEK3-206ENST00000611833 TTLL8A6PVC2 850 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 NPIPA5E9PKD4 350 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 OR2A4O95047 310 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 MAP2K6P52564 334 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 DLX5P56178 289 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 FAM166AQ6J272 317 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 LRFN4Q6PJG9 635 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 ZNF627Q7L945 461 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 MISPQ8IVT2 679 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 PLPP5Q8NEB5 264 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 OR13C3Q8NGS6 347 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 OR6N1Q8NGY5 312 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 THAP3Q8WTV1 239 aaPredicted RBP15.45■□□□□ 0.06
NEK3-206ENST00000611833 DVL3Q92997 716 aaPredicted RBP15.45■□□□□ 0.06
NEK3-206ENST00000611833 OR2A7Q96R45 310 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 NPAS1Q99742 590 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 NPIPA1Q9UND3 350 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 MRPS17Q9Y2R5 130 aaKnown RBP15.45■□□□□ 0.06
NEK3-206ENST00000611833 RPS10-NUDT3A0A1W2PQS6 291 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 PLSCR5A0PG75 271 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 OR2M5A3KFT3 312 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 A6NIZ1 184 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 DOK2O60496 412 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 ZNF354AO60765 605 aaPredicted RBP15.45■□□□□ 0.06
NEK3-206ENST00000611833 CD3DP04234 171 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 CXCL2P19875 107 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 NFYAP23511 347 aaPredicted RBP15.45■□□□□ 0.06
NEK3-206ENST00000611833 RAP1BP61224 184 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 RAP1AP62834 184 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 OR7A5Q15622 319 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 DNM1P34Q6PK57 102 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 FAM198BQ6UWH4 519 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 COMMD7Q86VX2 200 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 BPHLQ86WA6 291 aaPredicted RBP15.45■□□□□ 0.06
NEK3-206ENST00000611833 PMEPA1Q969W9 287 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 WDR89Q96FK6 387 aaPredicted RBP15.45■□□□□ 0.06
NEK3-206ENST00000611833 HHLA2Q9UM44 414 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 R4GMQ9 66 aa15.45■□□□□ 0.06
NEK3-206ENST00000611833 A0A1W2PPC1 479 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 DCDC2BA2VCK2 349 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 FTCDNL1E5RQL4 147 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 BCAT2O15382 392 aaPredicted RBP15.44■□□□□ 0.06
NEK3-206ENST00000611833 HRGP04196 525 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 ENPP1P22413 925 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 AP2S1P53680 142 aaPredicted RBP15.44■□□□□ 0.06
NEK3-206ENST00000611833 FBXW4P57775 412 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 ARPC4P59998 168 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 ACTBP60709 375 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 ACTG1P63261 375 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 DHODHQ02127 395 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 FMODQ06828 376 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 CSRP2Q16527 193 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 STEAP1BQ6NZ63 245 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 DCXRQ7Z4W1 244 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 STT3BQ8TCJ2 826 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 SLC25A28Q96A46 364 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 EXO5Q9H790 373 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 TMEM138Q9NPI0 162 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 CGGBP1Q9UFW8 167 aaPredicted RBP15.44■□□□□ 0.06
NEK3-206ENST00000611833 SUSD2Q9UGT4 822 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 MS4A18H0YCH9 400 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 I3L521 148 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 SNAPC5O75971 98 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 SIX6O95475 246 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 PDGFAP04085 211 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 AFF3P51826 1226 aaKnown RBP15.44■□□□□ 0.06
NEK3-206ENST00000611833 TOMM20Q15388 145 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 MS4A18Q3C1V0 323 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 WDR74Q6RFH5 385 aaPredicted RBP15.44■□□□□ 0.06
NEK3-206ENST00000611833 KMT5CQ86Y97 462 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 LINC00346Q8IVM7 164 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 JAGN1Q8N5M9 183 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 OR5M1Q8NGP8 315 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 SUN5Q8TC36 379 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 DNASE2BQ8WZ79 361 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 SFXN2Q96NB2 322 aa15.44■□□□□ 0.06
NEK3-206ENST00000611833 ZNF768Q9H5H4 540 aaKnown RBP15.44■□□□□ 0.06
NEK3-206ENST00000611833 PRMT8Q9NR22 394 aaPredicted RBP15.44■□□□□ 0.06
NEK3-206ENST00000611833 ARID1BQ8NFD5 2236 aaPredicted RBP15.43■□□□□ 0.06
NEK3-206ENST00000611833 ANKUB1A6NFN9 424 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 IGFBP3P17936 291 aaPredicted RBP15.43■□□□□ 0.06
NEK3-206ENST00000611833 DAP3P51398 398 aaKnown RBP15.43■□□□□ 0.06
NEK3-206ENST00000611833 OC90Q02509 493 aaPredicted RBP15.43■□□□□ 0.06
NEK3-206ENST00000611833 SSBP1Q04837 148 aaKnown RBP15.43■□□□□ 0.06
NEK3-206ENST00000611833 SPOCK1Q08629 439 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 C17orf67Q0P5P2 114 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 FAM209AQ5JX71 171 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 RFPL4BQ6ZWI9 263 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 H1FNTQ75WM6 255 aaPredicted RBP15.43■□□□□ 0.06
NEK3-206ENST00000611833 TMPRSS9Q7Z410 1059 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 CLEC1AQ8NC01 280 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 APCDD1LQ8NCL9 501 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 SLC26A10Q8NG04 563 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 OR6M1Q8NGM8 313 aa15.43■□□□□ 0.06
NEK3-206ENST00000611833 GPX8Q8TED1 209 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms