RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 PRAMEF27A3QJZ7 478 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 A6NLC8 198 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 TOR1AO14656 332 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 XRCC3O43542 346 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 HYAL3O43820 417 aaPredicted RBP11.3□□□□□ -0.6
CDH1-212ENST00000611625 SCO1O75880 301 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 DBHP09172 617 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 SLC6A1P30531 599 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 OR1D5P58170 312 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 ACSM1Q08AH1 577 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 DND1Q8IYX4 353 aaKnown RBP11.3□□□□□ -0.6
CDH1-212ENST00000611625 OR52B4Q8NGK2 314 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 OR4C3Q8NH37 302 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 ZNF285Q96NJ3 590 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 DUSP23Q9BVJ7 150 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 ZNF416Q9BWM5 594 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 OR2F2O95006 317 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 ZFPL1O95159 310 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 IGHA1P01876 353 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 SERPINE2P07093 398 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 SNRNP70P08621 437 aaKnown RBP11.3□□□□□ -0.6
CDH1-212ENST00000611625 NME2P22392 152 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 EFNA3P52797 238 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 DCDP81605 110 aaKnown RBP11.3□□□□□ -0.6
CDH1-212ENST00000611625 HSF1Q00613 529 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 OR2F1Q13607 317 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 ZNF74Q16587 644 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 ST3GAL2Q16842 350 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 VWA2Q5GFL6 755 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 PLCXD3Q63HM9 321 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 OR10K2Q6IF99 312 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 CORO6Q6QEF8 472 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 ZNF775Q96BV0 537 aaPredicted RBP11.3□□□□□ -0.6
CDH1-212ENST00000611625 GPA33Q99795 319 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 TXNIPQ9H3M7 391 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 ZNF286AQ9HBT8 521 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 QPCTLQ9NXS2 382 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 DNAJB12Q9NXW2 375 aaKnown RBP11.3□□□□□ -0.6
CDH1-212ENST00000611625 ATPIF1Q9UII2 106 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 CKAP5Q14008 2032 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 CIB4A0PJX0 185 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 PTHLHP12272 177 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 EPHA1P21709 976 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 PPT1P50897 306 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 MFGE8Q08431 387 aaPredicted RBP11.29□□□□□ -0.6
CDH1-212ENST00000611625 OR1M1Q8NGA1 313 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 GLYATL2Q8WU03 294 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 ST8SIA4Q92187 359 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 NAT6Q93015 286 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 PBX4Q9BYU1 374 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 CCDC86Q9H6F5 360 aaKnown RBP11.29□□□□□ -0.6
CDH1-212ENST00000611625 PRAMEF25A6NGN4 478 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 DDAH2O95865 285 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 APOBEC1P41238 236 aaKnown RBP11.29□□□□□ -0.6
CDH1-212ENST00000611625 IAH1Q2TAA2 248 aaPredicted RBP11.29□□□□□ -0.6
CDH1-212ENST00000611625 PRTGQ2VWP7 1150 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 GLDNQ6ZMI3 551 aaPredicted RBP11.29□□□□□ -0.6
CDH1-212ENST00000611625 OR52N5Q8NH56 324 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 HSD17B8Q92506 261 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 PIGCQ92535 297 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 C3orf49Q96BT1 292 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 DHRS9Q9BPW9 319 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 DNTTIP1Q9H147 329 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 S1PR5Q9H228 398 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 PIGMQ9H3S5 423 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 BANF2Q9H503 90 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 CHST11Q9NPF2 352 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 MRPS2Q9Y399 296 aaKnown RBP11.29□□□□□ -0.6
CDH1-212ENST00000611625 CCDC88CQ9P219 2028 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 MEIKINA0A087WXM9 373 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 D6RAR5 112 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 PYCARD-AS1I3L0S3 204 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 OR7C1O76099 320 aaPredicted RBP11.29□□□□□ -0.6
CDH1-212ENST00000611625 OR4E1P0C645 316 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 CXCL12P48061 93 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 HTRA4P83105 476 aaPredicted RBP11.29□□□□□ -0.6
CDH1-212ENST00000611625 NPSR1Q6W5P4 371 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 SFTPA1Q8IWL2 248 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 OR10R2Q8NGX6 335 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 OR1S1Q8NH92 325 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 SLAMF6Q96DU3 332 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 ACAD8Q9UKU7 415 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 PIKFYVEQ9Y2I7 2098 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 OR5H14A6NHG9 310 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 TUBAL3A6NHL2 446 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 IL5P05113 134 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 HTR5AP47898 357 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 PRICKLE4Q2TBC4 344 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 CLLU1Q5K131 121 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 MAMSTRQ6ZN01 415 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 ESX1Q8N693 406 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 FAM71CQ8NEG0 241 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 LRRC46Q96FV0 321 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 TRMT61AQ96FX7 289 aaKnown RBP11.29□□□□□ -0.6
CDH1-212ENST00000611625 OR6C1Q96RD1 312 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 B9D1Q9UPM9 204 aa11.29□□□□□ -0.6
CDH1-212ENST00000611625 A0A1W2PPV9 198 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 OR6C68A6NDL8 312 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 SLC17A2O00624 439 aa11.28□□□□□ -0.6
CDH1-212ENST00000611625 GREM1O60565 184 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms